PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIT33896

Organism

Nicotiana attenuata

Taxonomic ID

49451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

CAMTA

Protein Properties

Length: 1102aa MW: 123588 Da PI: 5.9461

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIT33896	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	182.4	5.2e-57	20	136	2	118
CG-1 2 lkekkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqrrcywlL 102 l+ ++rwl++ ei++iL+n++k++++ e+++rp+sgsl+L++rk++ryfrkDG+sw+kkkdgktv+E+he+LK g+++vl+cyYah+een++fqrr+yw+L OIT33896 20 LEAQHRWLRPAEICEILKNYQKFRIAPEPPNRPPSGSLFLFDRKVLRYFRKDGHSWRKKKDGKTVKEAHERLKAGSIDVLHCYYAHGEENENFQRRSYWML 120 5679*********************************************************************************************** PP CG-1 103 eeelekivlvhylevk 118 eee+++ivlvhy+evk OIT33896 121 EEEMSHIVLVHYREVK 136 ***********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 1102 aa Download sequence
MAESRRYGLN AQLDIDQILL EAQHRWLRPA EICEILKNYQ KFRIAPEPPN RPPSGSLFLF 60 DRKVLRYFRK DGHSWRKKKD GKTVKEAHER LKAGSIDVLH CYYAHGEENE NFQRRSYWML 120 EEEMSHIVLV HYREVKGNRT NFSRTREPQE ATPRFQETDE DVHSSEVDSS ASTKFYPNDY 180 QVNSQVTDTT SLSSAQASEY EDAESAYNQH PTSGFHSFLD AQPSMMQKAG EGLPVPYHPI 240 PFSNDHQVQF AGSSDMDFFS SAPGNKSGNT ANTYIPSRNL DFPSWETISV NNPAAYQSYH 300 FQPSSHSGAN NMTHEQGNTT TGQVFLNDFK KQERQNRIDG LGDWQTSEGD AAFLSKWSMD 360 QKLNPDLASD HTIRSSAAYN VELHNSLEAS HILPSHQDKH PMQNELPSQL SDANVGGSLN 420 AELDHNLSIG VRTDHSSLKQ PLLDGVLREG LKKLDSFDRW MSKELEDVSE PHMQSNSSSY 480 WDNVGDDDGV DNSTIASQVQ LDTYMLSPSL SQDQFFSIID FSPSWAFAGS EIKVLITGKF 540 LKSQPEVEKW ACMFGELEVP AEVIADGVLR CHTPNQKAGR VPFYITCSNR LACSEVREFE 600 FRVSEGQDVD VANSCSSSES LLHMRFGKLL SLESTVSLSS PPHSEDDVSH VYCKINSLLK 660 EDDDEWEEML NLTYENNFMA EKVKDQLLQK LLKEKLRVWL LQKVAEGGKG PSILDEGGQG 720 VLHFAAALGY DWAIPPTIAA GVSVNFRDVN GWTALHWAAS YGRERTVGFL ISLGAAPGAL 780 TDPTPKHPSG RTPADLASSN GHKGIAGYLA ESSLSSHLSS LELKEMKQGE NVQPFGEAVQ 840 TVSERSATPA WDGDCPHGVS LKDSLAAVRN ATQAAARIHQ VFRVQSFQRK QLKEHGGSEF 900 GLSDEHALSL LALKTNKAGQ HDEPVHTAAV RIQNKFRSWK GRRDYLLIRQ RIIKIQAHVR 960 GHQVRNKYKN IIWSVGILEK VILRWRRKGS GLRGFKPEAT LTEGSNTQDR PVQEDDYDFL 1020 KEGRKQTEQR LQKALARVKS MVQYPEARDQ YRRLLNVVSD MKETATTSDG APSNSVEAAD 1080 FGDDLIDLDD LLDDDTFMST AP

Sequence ? help Back to Top

Protein Sequence Length: 1102 aa Download sequence

MAESRRYGLN AQLDIDQILL EAQHRWLRPA EICEILKNYQ KFRIAPEPPN RPPSGSLFLF  60
DRKVLRYFRK DGHSWRKKKD GKTVKEAHER LKAGSIDVLH CYYAHGEENE NFQRRSYWML  120
EEEMSHIVLV HYREVKGNRT NFSRTREPQE ATPRFQETDE DVHSSEVDSS ASTKFYPNDY  180
QVNSQVTDTT SLSSAQASEY EDAESAYNQH PTSGFHSFLD AQPSMMQKAG EGLPVPYHPI  240
PFSNDHQVQF AGSSDMDFFS SAPGNKSGNT ANTYIPSRNL DFPSWETISV NNPAAYQSYH  300
FQPSSHSGAN NMTHEQGNTT TGQVFLNDFK KQERQNRIDG LGDWQTSEGD AAFLSKWSMD  360
QKLNPDLASD HTIRSSAAYN VELHNSLEAS HILPSHQDKH PMQNELPSQL SDANVGGSLN  420
AELDHNLSIG VRTDHSSLKQ PLLDGVLREG LKKLDSFDRW MSKELEDVSE PHMQSNSSSY  480
WDNVGDDDGV DNSTIASQVQ LDTYMLSPSL SQDQFFSIID FSPSWAFAGS EIKVLITGKF  540
LKSQPEVEKW ACMFGELEVP AEVIADGVLR CHTPNQKAGR VPFYITCSNR LACSEVREFE  600
FRVSEGQDVD VANSCSSSES LLHMRFGKLL SLESTVSLSS PPHSEDDVSH VYCKINSLLK  660
EDDDEWEEML NLTYENNFMA EKVKDQLLQK LLKEKLRVWL LQKVAEGGKG PSILDEGGQG  720
VLHFAAALGY DWAIPPTIAA GVSVNFRDVN GWTALHWAAS YGRERTVGFL ISLGAAPGAL  780
TDPTPKHPSG RTPADLASSN GHKGIAGYLA ESSLSSHLSS LELKEMKQGE NVQPFGEAVQ  840
TVSERSATPA WDGDCPHGVS LKDSLAAVRN ATQAAARIHQ VFRVQSFQRK QLKEHGGSEF  900
GLSDEHALSL LALKTNKAGQ HDEPVHTAAV RIQNKFRSWK GRRDYLLIRQ RIIKIQAHVR  960
GHQVRNKYKN IIWSVGILEK VILRWRRKGS GLRGFKPEAT LTEGSNTQDR PVQEDDYDFL  1020
KEGRKQTEQR LQKALARVKS MVQYPEARDQ YRRLLNVVSD MKETATTSDG APSNSVEAAD  1080
FGDDLIDLDD LLDDDTFMST AP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G22300.2	0.0	CAMTA family protein

Link Out ? help Back to Top
Ensembl	OIT33896