PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIT33617 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | ERF | ||||||||
Protein Properties | Length: 235aa MW: 26828.2 Da PI: 6.3669 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 52.1 | 1.6e-16 | 59 | 108 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y+GVr++ +Wv+eIr+p +k+ r++lg+f t+e Aa+a++ a+++l+g OIT33617 59 FYRGVRRRN-GDKWVCEIREP---NKKSRIWLGTFTTPEIAARAHDVAALALRG 108 7*****877.9*********9...347*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 235 aa Download sequence |
MDFEDDQTSN SSCSSSDHDI IDKKKNFDLS SCSMNVIKPS LHNKRRTGRK KFKETRHPFY 60 RGVRRRNGDK WVCEIREPNK KSRIWLGTFT TPEIAARAHD VAALALRGTK ASLNFPESSW 120 SLPKAQSSSP RDIQIAALQV SNKEIVSSPL KHSMSYLELE ESSCFQSPKD DQENSSKGYN 180 DSCELMEFVD EEAMFNMPIL IDSMAEGMLM TPPAMKRGFN WGDVEENVEF TLWKE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G25470.1 | 2e-43 | ERF family protein |
Link Out ? help Back to Top | |
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Ensembl | OIT33617 |