PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIT33326

Organism

Nicotiana attenuata

Taxonomic ID

49451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

G2-like

Protein Properties

Length: 292aa MW: 33458.4 Da PI: 9.2546

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIT33326	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	35.8	1.8e-11	236	260	1	25
G2-like 1 kprlrWtpeLHerFveaveqLGGse 25 k+r++W+peLH+rFv+a++qLGG++ OIT33326 236 KQRRCWSPELHRRFVDALHQLGGPQ 260 79*********************86 PP
2	Myb_DNA-binding	23	1.9e-07	238	259	1	22
TSSS-HHHHHHHHHHHHHTTTT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg 22 r W++e++ ++vda +qlGg+ OIT33326 238 RRCWSPELHRRFVDALHQLGGP 259 568*****************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 292 aa Download sequence
MGSSSKELNL DLNCVYVPKT ISDVLTEVSA IDDISKKLTK LNHFVLSLEE ELKKIEAFKR 60 ELPLCMVLLK DAIERLKEEA LQYKGKDKRP VPLKGNSEES ERVKKSNEIS DKKNWMSSVQ 120 LWSTPVHYES IDLGKQGQFL HLKSSGVEGR ENEYQLGIYK LKNDRGAFMT FQENSVRSVK 180 DEKKGLPVND LSLCMTVGER EKDPNPVDVS VKRVNGGGRS NGCSSNFLQE KSQQRKQRRC 240 WSPELHRRFV DALHQLGGPQ GYSTFYFYFH FLCLRAYQLL VYISLVILSI KT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37180.1	8e-33	G2-like family protein

Link Out ? help Back to Top
Ensembl	OIT33326