PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT33212
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family WRKY
Protein Properties Length: 309aa    MW: 35019.8 Da    PI: 4.8311
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT33212genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY89.23.5e-28130188259
               --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
      WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
               +D+++WrKYGqK++kgs++prsYYrC+s+ gC ++k+ve+s ++   +++tY+ eHnh+
  OIT33212 130 SDKWAWRKYGQKPIKGSPYPRSYYRCSSSkGCLARKQVEQSCTEIGSFIVTYTAEHNHS 188
               79*************************998****************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 309 aa     Download sequence    
MMDWGLQAVV IGSSTCSNIQ YGANYIDQKS YFSPLNFQES EYLAFSEMKT EVLNDELEEL  60
YKPFYPVVGQ NTLMASSISF PKEPKEEQKE ENEQQSFGLV AAPTYVPKYK RRKNEQKRVV  120
FQLKAEDLSS DKWAWRKYGQ KPIKGSPYPR SYYRCSSSKG CLARKQVEQS CTEIGSFIVT  180
YTAEHNHSQP TRRNSLAGTI KTKFPTSNNS NKNESPKIEK EKISSTHGST SNLVLSKATL  240
LNIESNISES QFPEIEINQE NNMFEGSDEN ECVSIEDMFD GDFFAGLEDI NDGFNSSFGC  300
NNSTFPFSS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G23550.18e-38WRKY family protein