PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIT32940 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | ERF | ||||||||
Protein Properties | Length: 155aa MW: 17611.7 Da PI: 9.7195 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 53.7 | 5.1e-17 | 20 | 69 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y+G+r +k +g+WvAeIr+p +kr r++lg++ ++ Aa+a++ a +l+g OIT32940 20 PYRGIRMRK-WGKWVAEIREP---NKRSRIWLGSYSSPVAAARAYDTAVFYLRG 69 69*****99.**********9...336*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 155 aa Download sequence |
MVSMMEGEKR KQRQHQQDKP YRGIRMRKWG KWVAEIREPN KRSRIWLGSY SSPVAAARAY 60 DTAVFYLRGP TARLNFPECI VNDDRELHDL SAASIRKKAT EVGARVDALQ IAALHHNSSA 120 GSTESNSNSN INPRRVTIKP DLNEYPSPES CDEDN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G67190.1 | 6e-52 | ERF family protein |
Link Out ? help Back to Top | |
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Ensembl | OIT32940 |