PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT32726
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family ERF
Protein Properties Length: 351aa    MW: 39637.4 Da    PI: 6.7949
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT32726genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.96e-19169219256
       AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                y+GVr+++ +g+WvAeIr p++   r+r +lg+f+tae+Aa a+++ + kl+ge
  OIT32726 169 LYRGVRQRH-WGKWVAEIRLPRK---RTRLWLGTFDTAEDAAMAYDREAYKLRGE 219
               59******9.**********954...5**************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 351 aa     Download sequence    
MNWQRDNGKD LNTSFRKKIK IPENQLCFQS SVSSSHQTLL PPSVPYNAPT HIAFSPTSSS  60
TSPSSMVVFP FALDGTQQPT ECSHQLISNN TPLFRPLHQN QQQMISFTAQ HPQYFSRELG  120
PFQHQLQHCN ETLNLSPRGR TTMLNKSGQS NRVPLFSPLL QHPYSTTKLY RGVRQRHWGK  180
WVAEIRLPRK RTRLWLGTFD TAEDAAMAYD REAYKLRGEN AKLNFPELFL DKNKAASPEN  240
LQLKQPQQPP SECGNFEEET GSSEVIAIDG VQGNVENWGA TLSDFEAWLN AIPVGWGPGS  300
PVWDDLDTNN NLILPQTINF GDVHQQKPHN SDLQGTMKPA EEHVGLELDL L
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G20880.12e-59ERF family protein