PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT32711
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family ERF
Protein Properties Length: 261aa    MW: 29194.7 Da    PI: 7.3409
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT32711genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP265.41.2e-20122171255
       AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                y+GVr+++ +g+W+AeIrdp+    r +r++lg+f tae+Aa+a+++a+ +++g
  OIT32711 122 SYRGVRQRP-WGKWAAEIRDPR----RaTRVWLGTFNTAEDAARAYDKAAIEFRG 171
               69*******.**********82....48************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 261 aa     Download sequence    
MQRSTKKAKQ EETVSINHLI SKPKFTDEQE FSIMVSALKN VITGDTTQEF QYSMTTNSAT  60
IVSSSSPSTS VSSLDPPLFR VSTEPEPCRF CKIKGCLGCN YFGAGPVADD DYNNKAKKKK  120
KSYRGVRQRP WGKWAAEIRD PRRATRVWLG TFNTAEDAAR AYDKAAIEFR GPRAKLNFSF  180
ADYTSVQLQQ NITTSISSLP QQEQEPVQLE QGIKTDAGIG KEEEFWDQLM KWDNEIQDCL  240
GMMDFNGHSS DSAGGSIAHS F
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G34410.11e-32ERF family protein