PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT32710
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family ERF
Protein Properties Length: 264aa    MW: 29627.2 Da    PI: 8.4533
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT32710genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP264.42.3e-20124173255
       AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                y+GVr+++ +g+W+AeIrdp+    r +r++lg+f tae+Aa+a+++a+ +++g
  OIT32710 124 NYRGVRQRP-WGKWAAEIRDPR----RaARVWLGTFNTAEDAARAYDKAAIEFRG 173
               59*******.**********82....48************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 264 aa     Download sequence    
MQRSTKKAKQ EEIVSVNHLI SKPKFSDEQE FSIMVSALTN VITGDTTQYA MTTNSATIVS  60
SSSPSTSMSN IEPPLFRVPT EPEPCQFCKI KGCIGCNYFG ASPVADEDYN KKAKTVVFKK  120
KKKNYRGVRQ RPWGKWAAEI RDPRRAARVW LGTFNTAEDA ARAYDKAAIE FRGPRAKLNF  180
SFGDYTSIQQ QNATTSTTFS ISQQQRQVPV QLQQGINTDF GIEKEEEFWD QLMASDNEIQ  240
DCLRMMDFNG ESSYSGGGSI AHSF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G34410.13e-32ERF family protein