PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIT32576

Organism

Nicotiana attenuata

Taxonomic ID

49451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

HB-other

Protein Properties

Length: 916aa MW: 101409 Da PI: 5.8234

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIT32576	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	15.1	4e-05	688	748	1	54
TT--SS--HHHHHHHHHHHHHSSS-..-HHHHHHHHHHC.....TS-HHHHHHHHHHHHHH CS Homeobox 1 rrkRttftkeqleeLeelFeknryp..saeereeLAkkl.....gLterqVkvWFqNrRak 54 +rkRt ++++q+ +e++ ++ + ++++ e Ak+l ++t++q k+W Nr+a+ OIT32576 688 KRKRTIMNEKQISLMEKALMDEPDMqrNKASLEFWAKELsvhgsEVTKSQLKNWLNNRKAR 748 79****************977761155678999***9***************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 916 aa Download sequence
MKEEGASCST DPVARPIHPA LDLISAVKSL HGLSSQELSR LIREAENNIL QHIPDNGLNI 60 QIDVEKLARH LALHLIAVIL ASEANAGLLK YLLSGFQLLH SLSDLASRNP KIEQILLDDV 120 KVSEQLLDLV FYSLVILCTY SKVSNDMGLL HSTLVASSLY LLTVCISSQW HELAQVLLAY 180 YKVDVLIDTA FAAVTADIKI LRRNLSADHA HSQQEYGLKA EETLNHLCQQ CEASLQFLQS 240 LCQQKSFRER LVKNKELSSK GGVLLLAQAV MHLDVSPLVT LSSSIIAAVS RLKSKVLSIL 300 LNLCEAESLS YLDEVASTPA SLDLAKSIAL EVLNLLKKMF GTGFQQSVAP SDKIYPKGQL 360 QLNAMRLADI FSDDSNFRSF ITTHFTEVLT EIFSVAHGEF VSSWCSSDLP IREEDATLEY 420 DPFAAAGWVL DLFPFSDQSN AMSIEPTFVP SHVPRLSYPH QRTSLLVKVL ANLHCFVPDI 480 CKEEKDLFLN KFVQCLRKKV SETPEGFKSI SDSQKAATVS RNLGSLLSHA ESLIPAFLNE 540 EDVQLLRVFI TQLESLITPR ARGENRVQEA QNLEACLPPQ LREVAMDLNN RLNQLYSRVN 600 GKGQSGEAGM KAEMTEQDKF IATDIEMKDI EKDTQNVETS GSDSSSSRSR HPTDQVGKVE 660 KINCNGPGDG REDEVAEASQ HEEKQQRKRK RTIMNEKQIS LMEKALMDEP DMQRNKASLE 720 FWAKELSVHG SEVTKSQLKN WLNNRKARIA RAAKDGRTLS EGDNLDKHGG SLVLPPCDSP 780 GSPVEDVGNL SAARENVQRV TGPAPSTCFT ENSAAVSVAS TETAKCMAGQ YVVLVNDKAE 840 EIGRGKVCQV SGKWYQRDLE ELGTCVVDII DLKVDRSAKL PYPSELTGTS FDQAERKFGF 900 MRVLWQSSKL FVLPAR

Sequence ? help Back to Top

Protein Sequence Length: 916 aa Download sequence

MKEEGASCST DPVARPIHPA LDLISAVKSL HGLSSQELSR LIREAENNIL QHIPDNGLNI  60
QIDVEKLARH LALHLIAVIL ASEANAGLLK YLLSGFQLLH SLSDLASRNP KIEQILLDDV  120
KVSEQLLDLV FYSLVILCTY SKVSNDMGLL HSTLVASSLY LLTVCISSQW HELAQVLLAY  180
YKVDVLIDTA FAAVTADIKI LRRNLSADHA HSQQEYGLKA EETLNHLCQQ CEASLQFLQS  240
LCQQKSFRER LVKNKELSSK GGVLLLAQAV MHLDVSPLVT LSSSIIAAVS RLKSKVLSIL  300
LNLCEAESLS YLDEVASTPA SLDLAKSIAL EVLNLLKKMF GTGFQQSVAP SDKIYPKGQL  360
QLNAMRLADI FSDDSNFRSF ITTHFTEVLT EIFSVAHGEF VSSWCSSDLP IREEDATLEY  420
DPFAAAGWVL DLFPFSDQSN AMSIEPTFVP SHVPRLSYPH QRTSLLVKVL ANLHCFVPDI  480
CKEEKDLFLN KFVQCLRKKV SETPEGFKSI SDSQKAATVS RNLGSLLSHA ESLIPAFLNE  540
EDVQLLRVFI TQLESLITPR ARGENRVQEA QNLEACLPPQ LREVAMDLNN RLNQLYSRVN  600
GKGQSGEAGM KAEMTEQDKF IATDIEMKDI EKDTQNVETS GSDSSSSRSR HPTDQVGKVE  660
KINCNGPGDG REDEVAEASQ HEEKQQRKRK RTIMNEKQIS LMEKALMDEP DMQRNKASLE  720
FWAKELSVHG SEVTKSQLKN WLNNRKARIA RAAKDGRTLS EGDNLDKHGG SLVLPPCDSP  780
GSPVEDVGNL SAARENVQRV TGPAPSTCFT ENSAAVSVAS TETAKCMAGQ YVVLVNDKAE  840
EIGRGKVCQV SGKWYQRDLE ELGTCVVDII DLKVDRSAKL PYPSELTGTS FDQAERKFGF  900
MRVLWQSSKL FVLPAR

Link Out ? help Back to Top
Ensembl	OIT32576