PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIT32466 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | MYB | ||||||||
Protein Properties | Length: 449aa MW: 50059.7 Da PI: 7.0257 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 50.5 | 4.6e-16 | 117 | 162 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg W + Ed +l+++v+ +G+ +W++Ia+++ gR++k+c++rw++ OIT32466 117 RGHWRPAEDAKLKELVAIYGPQNWNLIAEKLE-GRSGKSCRLRWFNQ 162 899*****************************.***********996 PP | |||||||
2 | Myb_DNA-binding | 56.1 | 8.7e-18 | 169 | 212 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 r ++T+eE+e+l a++++G++ W+ Iar ++ gRt++ +k++w+ OIT32466 169 RRAFTEEEEERLMAAHRLYGNK-WAMIARLFP-GRTDNAVKNHWHV 212 678*******************.*********.***********96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 449 aa Download sequence |
MSLSSSTSSS SSSPMSSTSM GMCFADMNSL SITPKHDNES TKTRGSWDFQ FLNKEAFSQS 60 LDEAETSEEN NETIDLNASC FNDEKPITMH SSTIFNSSSS NIGKEITESG QSKLCARGHW 120 RPAEDAKLKE LVAIYGPQNW NLIAEKLEGR SGKSCRLRWF NQLDPRINRR AFTEEEEERL 180 MAAHRLYGNK WAMIARLFPG RTDNAVKNHW HVIMARKYRE QSSAYRRRKM GQFVYRRTTV 240 EEDSNSSLFV SSSKEVAEVA MNGETQTPII SVGQNSANPF GSLKINNDGP NGWVVYGPNG 300 SPHMAASVGE AIPSTKTNVP LLSPYSPFFA PFDTLPGHCG NEEMNILNQQ GRSWERQREA 360 SNISHNIISH HHHSLHPSNS LMMLNSMQQQ SQCLQFPYSN FANVTTARAQ IPSQVIVKED 420 RRSSSSDNSQ CDAIAPPPPF IDFLGVGAT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G26780.1 | 3e-76 | MYB family protein |
Link Out ? help Back to Top | |
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Ensembl | OIT32466 |