PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIT32116 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | MYB_related | ||||||||
Protein Properties | Length: 126aa MW: 14254.8 Da PI: 5.1648 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 33.5 | 9.6e-11 | 3 | 47 | 3 | 45 |
SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwq 45 WT+ +++ +a +++ ++ +W+ Iar++g g+++++++ ++ OIT32116 3 TWTAKQNKKFEEALALYDKDtsdRWNNIARCVG-GKSAEEVRRHYE 47 5********************************.**********96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 126 aa Download sequence |
MATWTAKQNK KFEEALALYD KDTSDRWNNI ARCVGGKSAE EVRRHYELLV KDIMQIENDQ 60 VPLPNYTTAG SDGRSYANEQ RYCNSLLLTQ ITYFAQTLQK YDQLDSFGGS DTSALAFLKG 120 PSNVTN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G39250.1 | 6e-34 | MYB_related family protein |
Link Out ? help Back to Top | |
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Ensembl | OIT32116 |