PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIT32060 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | ERF | ||||||||
Protein Properties | Length: 224aa MW: 24004.8 Da PI: 10.7057 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 60.5 | 3.9e-19 | 27 | 76 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr ++ +gr++AeIrdp g+++r++lg+f+ta eAaka++ a++ l+g OIT32060 27 HYRGVRKRP-WGRYAAEIRDP---GQKTRVWLGTFDTAVEAAKAYDTAARLLRG 76 6********.**********8...557***********************9998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 224 aa Download sequence |
MAENGHLAGT VAVPTANGGG VRSDEVHYRG VRKRPWGRYA AEIRDPGQKT RVWLGTFDTA 60 VEAAKAYDTA ARLLRGRRAI TNFSLTTEDS LMNTRDFMAK LSTRNHVNIN TNNHGPIQNS 120 DTGSSSGGGG AVRIPLPNQN PQSRHFPVTG CSAPLQLARD RYYVEALTRA GVLINRDPSS 180 QKKTIDFIGG GVNGGSGRGV QSEPPTTSTR PLNLELTLAP PGNM |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G44210.1 | 3e-33 | ERF family protein |
Link Out ? help Back to Top | |
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Ensembl | OIT32060 |