PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT32050
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family ERF
Protein Properties Length: 225aa    MW: 24905.5 Da    PI: 4.6351
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT32050genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.77e-1955106156
       AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
               + y+GVr ++ +g+Wv+eIr p++   + r++lg++ t+e+Aa+a++ a+++++ge
  OIT32050  55 PVYRGVRMRS-WGKWVSEIRQPRK---KSRIWLGTYPTPEMAARAHDVAALSIKGE 106
               68*****998.**********843...6************************9986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 225 aa     Download sequence    
MGEFGVQPSS FSSNYTNNMV LDTSNKSKTE EPEEKRWTKR TRDQYSNCTE NRAYPVYRGV  60
RMRSWGKWVS EIRQPRKKSR IWLGTYPTPE MAARAHDVAA LSIKGESAIL NFPQLVESLP  120
RPASVSPTDV QAAAAKAAAM DDVLNSVSSS SSSSSSVSEE LLGQITELPS LEGAFDSDEL  180
KLSDSADGWV YPPSPWGAFD GEFYSYSFEQ TAIGESLIST TDWRC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G11590.16e-54ERF family protein