PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIT32042 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 253aa MW: 28986.9 Da PI: 4.7685 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 62.3 | 7.2e-20 | 43 | 95 | 4 | 56 |
-SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 4 RttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 ++f++eq++ Le++Fe++ ++ +++++LA++lgL+ rqV +WFqN+Ra++k OIT32042 43 TRRFSDEQIKSLETMFENETKLEPRKKQQLARELGLQPRQVAIWFQNKRARWK 95 469*************************************************9 PP | |||||||
2 | HD-ZIP_I/II | 123 | 1.5e-39 | 42 | 133 | 2 | 93 |
HD-ZIP_I/II 2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 + rr+s+eq+k+LE++Fe+e+kLep++K++lareLglqprqva+WFqn+RAR+k+kqlE+dy+ Lk+++d+l+++ ++L+ke+++L +l++ OIT32042 42 NTRRFSDEQIKSLETMFENETKLEPRKKQQLARELGLQPRQVAIWFQNKRARWKSKQLERDYNILKSNFDNLASQYNSLKKENQSLLFQLQK 133 569***********************************************************************************999886 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 253 aa Download sequence |
MFDGGEFSCT SSAAALNSAE CFSSSSFSSL PSSKKKKVNN KNTRRFSDEQ IKSLETMFEN 60 ETKLEPRKKQ QLARELGLQP RQVAIWFQNK RARWKSKQLE RDYNILKSNF DNLASQYNSL 120 KKENQSLLFQ LQKLNDLMQK SEKEGGQYCS IGFDQESYNR DNNTIKNKEM EGKPSLSFDL 180 SEHGVNGVIS DDDSSIKADY FGLDEESDHL LKMVEAGDSS LTSPENWGTL EDDGLLNQQP 240 NGCNYDQWWD FWS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G46680.1 | 8e-71 | HD-ZIP family protein |
Link Out ? help Back to Top | |
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Ensembl | OIT32042 |