PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIT31789

Organism

Nicotiana attenuata

Taxonomic ID

49451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

WRKY

Protein Properties

Length: 612aa MW: 66669.6 Da PI: 7.2827

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIT31789	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	95.7	3.2e-30	281	340	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 ++Dg++WrKYGqK kg+++pr+YYrCt a +Cpv+k+v+r+aed +++++tYeg+Hnh+ OIT31789 281 MNDGCQWRKYGQKIAKGNPCPRAYYRCTVAqSCPVRKQVQRCAEDMSILITTYEGTHNHP 340 58*************************99**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 612 aa Download sequence
MPYMEATLRN SIHGGVVKEE NKNKAESSPD RESCAENIFL KVGKGRKERE DDKSKPSSPQ 60 HKDFTLDNEG TAVMVKRERS PPELNSMASS STQKEQNDQL ASAKVEMREV MEENQRLRMH 120 LDRIMKDYRN LQMQFHDIAQ KEAEKSSSTV NTTHHESDQE ADQLVSLCLG RTSSDMKTEE 180 LSKIFSKDKA HYNNDEEEYK AGGLTLGLDC KFEMSAKTTP TTESSPVNLS PENSLEETKE 240 ENGETNKILK TMRNGDDDVS QQNPTKRARV SVRVRCDAPT MNDGCQWRKY GQKIAKGNPC 300 PRAYYRCTVA QSCPVRKQVQ RCAEDMSILI TTYEGTHNHP LPLAATAMAS TTAAAASMLL 360 SGSSSSSDPS PQVTAAAAAA TTTSANLNGL NFYLSDTSKS KPPFYFPNSS FSSSSAPNSL 420 PTITLDLTST SSSSSLSHLT RMGSTSTFPP ARYNNNSSAN VLNFSSLESN PLPISWSNGV 480 LNYANQAYNK NQNIASLAFS SRPTQENLFQ SYLQRNNTQS ASLPPDAISA ATKAITSDPN 540 FHSALAAALT SIIGNTGIGN NSASTFLNKP TSSSANTQSA NNNLVFFTQP NSSLPFSAPK 600 GKSTSPSDNK FD

Sequence ? help Back to Top

Protein Sequence Length: 612 aa Download sequence

MPYMEATLRN SIHGGVVKEE NKNKAESSPD RESCAENIFL KVGKGRKERE DDKSKPSSPQ  60
HKDFTLDNEG TAVMVKRERS PPELNSMASS STQKEQNDQL ASAKVEMREV MEENQRLRMH  120
LDRIMKDYRN LQMQFHDIAQ KEAEKSSSTV NTTHHESDQE ADQLVSLCLG RTSSDMKTEE  180
LSKIFSKDKA HYNNDEEEYK AGGLTLGLDC KFEMSAKTTP TTESSPVNLS PENSLEETKE  240
ENGETNKILK TMRNGDDDVS QQNPTKRARV SVRVRCDAPT MNDGCQWRKY GQKIAKGNPC  300
PRAYYRCTVA QSCPVRKQVQ RCAEDMSILI TTYEGTHNHP LPLAATAMAS TTAAAASMLL  360
SGSSSSSDPS PQVTAAAAAA TTTSANLNGL NFYLSDTSKS KPPFYFPNSS FSSSSAPNSL  420
PTITLDLTST SSSSSLSHLT RMGSTSTFPP ARYNNNSSAN VLNFSSLESN PLPISWSNGV  480
LNYANQAYNK NQNIASLAFS SRPTQENLFQ SYLQRNNTQS ASLPPDAISA ATKAITSDPN  540
FHSALAAALT SIIGNTGIGN NSASTFLNKP TSSSANTQSA NNNLVFFTQP NSSLPFSAPK  600
GKSTSPSDNK FD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G15130.1	1e-62	WRKY family protein

Link Out ? help Back to Top
Ensembl	OIT31789