PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIT31675 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 245aa MW: 28256.1 Da PI: 8.2869 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 97.5 | 5.6e-31 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krienk+nrqvtf+kRrng+lKKA+ELSvLC+aeva+iifs++gklye++s OIT31675 9 KRIENKINRQVTFAKRRNGLLKKAYELSVLCEAEVALIIFSNRGKLYEFCS 59 79***********************************************96 PP | |||||||
2 | K-box | 94.8 | 1.4e-31 | 78 | 174 | 4 | 100 |
K-box 4 ssgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkklee 100 + ++ + +++s+++e+ kLk+++e+Lqr qRhllGedL++L++ +L +Le qL++slk+iRs++++l+l+q+ +lq kek e+nk L++klee OIT31675 78 LEVNRSIKDNEQSSYREYLKLKAKYESLQRYQRHLLGEDLGPLNIDDLDHLEVQLDTSLKHIRSTRTQLMLDQLTDLQSKEKLWVEANKVLERKLEE 174 56666677889***********************************************************************************987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 245 aa Download sequence |
MGRGRVELKR IENKINRQVT FAKRRNGLLK KAYELSVLCE AEVALIIFSN RGKLYEFCSS 60 NNMLKTLDRY QKCSYGTLEV NRSIKDNEQS SYREYLKLKA KYESLQRYQR HLLGEDLGPL 120 NIDDLDHLEV QLDTSLKHIR STRTQLMLDQ LTDLQSKEKL WVEANKVLER KLEEIYAENN 180 LQQPWGGGEQ SVTYGQQHAQ SQGFFQPLDC NSTLQIGYDP ITTSSQITAV TNAQNVNGMV 240 PGWML |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G15800.1 | 1e-101 | MIKC_MADS family protein |
Link Out ? help Back to Top | |
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Ensembl | OIT31675 |