PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIT31612

Organism

Nicotiana attenuata

Taxonomic ID

49451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

G2-like

Protein Properties

Length: 369aa MW: 41327.6 Da PI: 8.2983

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIT31612	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	101.2	6.9e-32	182	235	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 pr+rWt++LH+rF++ave LGG+e+AtPk++lelm+vk+Ltl+hvkSHLQ+YR+ OIT31612 182 PRMRWTSTLHARFIHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRT 235 9****************************************************7 PP
2	Myb_DNA-binding	46.3	1e-14	183	234	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT ++ ++++av++lGg+ t+k++ + m k +tl ++ks++q+y+ OIT31612 183 RMRWTSTLHARFIHAVELLGGHeraTPKSVLELMDvKDLTLAHVKSHLQMYR 234 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 369 aa Download sequence
MELFPAQPDL SLQISPPNNK PSSSWKRSTS NSTNEDQEMD LGFWKRALES RNSSNNNNIN 60 NSSCFELSLS SIINPKPNSS QYFHHLQNTN TNFIHSLHQN QVLNPIRGVP VYNQNPHFQY 120 DNTNTTTTLP IPSSVSSFNY NHTISSSNSH SHFVSSHHHH QNGLIRSRFM SRFPAKRSMR 180 APRMRWTSTL HARFIHAVEL LGGHERATPK SVLELMDVKD LTLAHVKSHL QMYRTVKTTD 240 KAAAGAASSG QSEVFDNGSS GDNNSEELVL DIQNSAKSEL SIQQAARQEK DNYRGLWSNS 300 SSRESWQLHG NKQGDYPGNI SSLEQKDNME AKCLSYEGIS TEVSSSTITE ASPKKPNLEF 360 TLGIMPNIS

Sequence ? help Back to Top

Protein Sequence Length: 369 aa Download sequence

MELFPAQPDL SLQISPPNNK PSSSWKRSTS NSTNEDQEMD LGFWKRALES RNSSNNNNIN  60
NSSCFELSLS SIINPKPNSS QYFHHLQNTN TNFIHSLHQN QVLNPIRGVP VYNQNPHFQY  120
DNTNTTTTLP IPSSVSSFNY NHTISSSNSH SHFVSSHHHH QNGLIRSRFM SRFPAKRSMR  180
APRMRWTSTL HARFIHAVEL LGGHERATPK SVLELMDVKD LTLAHVKSHL QMYRTVKTTD  240
KAAAGAASSG QSEVFDNGSS GDNNSEELVL DIQNSAKSEL SIQQAARQEK DNYRGLWSNS  300
SSRESWQLHG NKQGDYPGNI SSLEQKDNME AKCLSYEGIS TEVSSSTITE ASPKKPNLEF  360
TLGIMPNIS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G32240.1	4e-63	G2-like family protein

Link Out ? help Back to Top
Ensembl	OIT31612