PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT31580
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family NAC
Protein Properties Length: 330aa    MW: 38384 Da    PI: 7.248
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT31580genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM179.59e-5671361129
       NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvkaeek.ewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkge 98 
               +ppGfrFhPtdeelv++yL+kk+++k+++l +vike+d+yk+ePwdL++  k+ +ee+ +wyfFs++dkky+tg+r+nratk+g+Wkatg+dk++++ k+ 
  OIT31580   7 VPPGFRFHPTDEELVDYYLRKKIASKRIDL-DVIKEIDLYKIEPWDLQElcKIGTEEQsDWYFFSHKDKKYPTGTRTNRATKAGFWKATGRDKAIYR-KHI 105
               69****************************.9***************954555554445**************************************.999 PP

       NAM  99 lvglkktLvfykgrapkgektdWvmheyrle 129
               l+g++ktLvfykgrap+g+k+dW+mheyrle
  OIT31580 106 LIGMRKTLVFYKGRAPNGQKSDWIMHEYRLE 136
               *****************************85 PP
Sequence ? help Back to Top
Protein Sequence    Length: 330 aa     Download sequence    
MNSFTHVPPG FRFHPTDEEL VDYYLRKKIA SKRIDLDVIK EIDLYKIEPW DLQELCKIGT  60
EEQSDWYFFS HKDKKYPTGT RTNRATKAGF WKATGRDKAI YRKHILIGMR KTLVFYKGRA  120
PNGQKSDWIM HEYRLETNEN GTTQEEGWAV CRVFKKKLAS TMRREGEHES LCWYNDDQVS  180
NFMPDFESPR RFPNPYSATA YHNPQFAYTN NMQHPPNNAF LQLPQLGSPK VPQSYGSNMN  240
QMVQSNSIYN NNNNSNYDHQ AVDQVTDWRV LDKFVASQLS QEDGCSKMET TAACCSSPAS  300
EQMNLQLQNE FKIQEMASEL ASSSQVDLWK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G12260.11e-124NAC family protein