PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT31318
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family HSF
Protein Properties Length: 501aa    MW: 55064.4 Da    PI: 4.5245
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT31318genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind112.92.2e-35341252102
                   HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXXX CS
  HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellekik 98 
                   Fl k+y++++d+++++++sw   +nsfvv+d+ efa+++LpkyFkh+nf+SFvRQLn+YgF+kv+ ++         weF+++ F +g+k+ll++i 
      OIT31318  34 FLVKTYDMVDDSSTDKIVSWGPANNSFVVWDPPEFARDLLPKYFKHNNFSSFVRQLNTYGFRKVDPDR---------WEFANEGFLRGQKHLLRSIS 121
                   9********************999*****************************************999.........******************** PP

                   XXXX CS
  HSF_DNA-bind  99 rkks 102
                   r+k 
      OIT31318 122 RRKP 125
                   *986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 501 aa     Download sequence    
MASNSSAAAD GGGGVPPPQP APAPMPSANA PPPFLVKTYD MVDDSSTDKI VSWGPANNSF  60
VVWDPPEFAR DLLPKYFKHN NFSSFVRQLN TYGFRKVDPD RWEFANEGFL RGQKHLLRSI  120
SRRKPAHGHA QQQQQPHGQS ASVGACVEVG KFGLEEEVER LKRDKNVLMQ ELVKLRQQQQ  180
TTDNQLQGMV QRLQGMEQRQ QQMMSFLAKA VNSPGFLAQF VQQQNESNRR IAEGSKKRRI  240
KQDIESQDHS VIPVDGQIVK YQPVMNESAK AMLRELSKLD SSPGLENFNN SPESFLIGDG  300
SAQSNASSTR VSGVTLQEVP STSGQPLLST ASAIAGQSSS SEITNSQFSD ISSLVGAQDL  360
PPVSLSATDM IMPELSQLQE ILPGNNMDII GSEMENDSFM DTSVGANGKM PLEIGSFSPD  420
PQIEWQTGLL DDIQELPGVG DPFWEKFLQS PSPGETEEMD PAAMDDISNE TKPQENGWDK  480
TQHMDQLTEQ MGLLTSNNQK L
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1236241KKRRIK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G32330.11e-122HSF family protein