PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIT30995 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | ERF | ||||||||
Protein Properties | Length: 177aa MW: 20264.8 Da PI: 8.7161 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 60.5 | 3.9e-19 | 29 | 79 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 + y+GVr+++ +g+Wv+eIr+p++ + r++lg+f ++e+Aa+a++ a+ +l+g OIT30995 29 PVYRGVRRRR-WGKWVSEIREPRK---KSRIWLGSFSSPEMAARAYDVAAYCLKG 79 68*****777.**********843...6************************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 177 aa Download sequence |
MEKRQPPPSP AVNCRKIDVQ RGGSSTRHPV YRGVRRRRWG KWVSEIREPR KKSRIWLGSF 60 SSPEMAARAY DVAAYCLKGC NAQLNFPDEI ERLPRPITST ARDIQAAAAM AANNAKIVKK 120 KNQENCGSDD FWEEIELPEL KDGNDYNLYS EVWQWSFCNY GMFPSDNSTF INDDGVV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G01250.1 | 5e-39 | ERF family protein |
Link Out ? help Back to Top | |
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Ensembl | OIT30995 |