PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | OIT30980 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
|
||||||||
Family | ERF | ||||||||
Protein Properties | Length: 251aa MW: 28372.9 Da PI: 6.6236 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 57 | 4.7e-18 | 67 | 117 | 2 | 56 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 y+GVr ++ +g+Wv+eIr+p++ + r++lg+f tae+Aa+a++ a+ +++g+ OIT30980 67 IYHGVRKRS-WGKWVSEIREPRK---KSRIWLGTFATAEMAARAHDVAAIAIKGH 117 69****888.**********843...6**********************999986 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 251 aa Download sequence |
MEEKSLIFNN THNETTYSTI LHFSSSSSLS KRPTTLASQK QETNNKKTKC SDMNKKTKKI 60 DDLKHPIYHG VRKRSWGKWV SEIREPRKKS RIWLGTFATA EMAARAHDVA AIAIKGHLAL 120 LNFPELVHQF PKPASKCAKD IQAAATKAAA LNICSTNCIT EESQGELMEQ FSSEEIESRE 180 SSSSTSSLSC KNEDPFLDLP DLLLDLSQKF DKFCYYNSPW ELAGAESNDS NLSEVWSEDL 240 YLWDYNYGTV L |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G11590.1 | 5e-34 | ERF family protein |
Link Out ? help Back to Top | |
---|---|
Ensembl | OIT30980 |