PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIT30779 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | ZF-HD | ||||||||
Protein Properties | Length: 174aa MW: 19616.6 Da PI: 9.0438 | ||||||||
Description | ZF-HD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | ZF-HD_dimer | 89.8 | 2.6e-28 | 8 | 63 | 4 | 57 |
ZF-HD_dimer 4 vrYkeClkNhAaslGghavDGCgEfmpsegee..gtaaalkCaACgCHRnFHRrev 57 Y+eCl+NhAaslG++a+DGCgEf+ +++++ + + +l+CaACgCHRnFHR+ OIT30779 8 DIYRECLRNHAASLGSYATDGCGEFTLDDNNNnsSGSVSLHCAACGCHRNFHRKVI 63 57************************9977664345889**************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 174 aa Download sequence |
MQGDKRNDIY RECLRNHAAS LGSYATDGCG EFTLDDNNNN SSGSVSLHCA ACGCHRNFHR 60 KVIYGASYSN NSSRDREIMA ADQLTDYAGG RTAEESPRSG KKRFRTKFTT DQKEKMLAFA 120 EKLGWTLQRK DQENETERFC REVGVSRKVF KVWMHNHKNN TSSVSTGNAS SLTQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G14440.1 | 7e-42 | ZF-HD family protein |
Link Out ? help Back to Top | |
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Ensembl | OIT30779 |