PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIT30658 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | ERF | ||||||||
Protein Properties | Length: 233aa MW: 25748.7 Da PI: 5.4295 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 56 | 9.8e-18 | 45 | 96 | 1 | 56 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkklege 56 + y+GVr++ + +Wv+e+r+p+ + kr++lg++ tae+Aa+a++ a+++l+g+ OIT30658 45 PVYRGVRRRN-NDKWVCELREPN----TqKRIWLGSYPTAEMAARAHDVAALALRGN 96 68*****887.8*********83....25*************************995 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 233 aa Download sequence |
MMNNSSSSCS SVIRAEASDE EIILLASSKP KKRAGRKKFK ETRHPVYRGV RRRNNDKWVC 60 ELREPNTQKR IWLGSYPTAE MAARAHDVAA LALRGNLATL NFADSAWRLQ VPVSKDPKDL 120 RQAAARAAEA FWPGEETDVN SRGAANAGNG HEEMKAATEE NAANNCMQNV VTAENVLYSN 180 SCGEVGMFGT QEWQTNMEEG SLLSPNPCLL GSCFSWDDDV ESNVEVSLWS YSI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G25470.1 | 3e-34 | ERF family protein |
Link Out ? help Back to Top | |
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Ensembl | OIT30658 |