PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | OIT30622 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
|
||||||||
Family | B3 | ||||||||
Protein Properties | Length: 252aa MW: 28717.3 Da PI: 9.8324 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 47.3 | 3.7e-15 | 11 | 99 | 1 | 98 |
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgr.yvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 ffkv++p + ++ l +p +f+ + +g+k e + tl++ +W+v++ +++++ +++ kGW++Fv+ +L+ gDf vF++ g+++f v++++ OIT30622 11 FFKVMVP---GFHAKLPIPPDFCLKLKGEKSE--KGTLKH-GKGTWNVEI--GRSKNGvMWFDKGWEQFVQNYNLRIGDFAVFEHLGNMNF--SVSLLD 99 6677744...4456699******999887555..566666.4569*****..777777799************************999999..777766 PP | |||||||
2 | B3 | 47.6 | 3e-15 | 165 | 240 | 14 | 88 |
T-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTE..EEE-TTHHHHHHHHT--TT-EEEEEE-SS.S CS B3 14 grlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgr..yvltkGWkeFvkangLkegDfvvFkldgr.s 88 l +p +f+ ++ + +++ +tl+ +sg s v l+++ ++++ +++t+GW++F +n+Lk+gD+++F+ d++ s OIT30622 165 PYLHIPTEFCHSNALL--QNTIITLTGPSGISCPVSLRICSGGKTlyVIMTTGWRNFFLSNKLKVGDVCIFQIDRTnS 240 4589******999777..5678***************6655555588999**********************887634 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 252 aa Download sequence |
MENELPISRR FFKVMVPGFH AKLPIPPDFC LKLKGEKSEK GTLKHGKGTW NVEIGRSKNG 60 VMWFDKGWEQ FVQNYNLRIG DFAVFEHLGN MNFSVSLLDS TGCDKKYLML EDGKQQQQVP 120 SQVKSPECRI EKRKPEGDVL LHQYVKGSSE FTARIKEYNV RKRSPYLHIP TEFCHSNALL 180 QNTIITLTGP SGISCPVSLR ICSGGKTLYV IMTTGWRNFF LSNKLKVGDV CIFQIDRTNS 240 DSKSITMNVR VM |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT4G31680.1 | 4e-19 | B3 family protein |
Link Out ? help Back to Top | |
---|---|
Ensembl | OIT30622 |