PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIT30614

Organism

Nicotiana attenuata

Taxonomic ID

49451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

Dof

Protein Properties

Length: 250aa MW: 28188.3 Da PI: 6.499

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIT30614	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	127	5.6e-40	27	86	3	62
zf-Dof 3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 e+a+kcprCdstntkfCyynnysl+qPryfCk+CrryWtkGG+lrnvPvGgg+rknk+++ OIT30614 27 EQAQKCPRCDSTNTKFCYYNNYSLTQPRYFCKSCRRYWTKGGTLRNVPVGGGCRKNKRTT 86 7899*****************************************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 250 aa Download sequence
MSSQTLENML AYTNKPEQEK KPRPAAEQAQ KCPRCDSTNT KFCYYNNYSL TQPRYFCKSC 60 RRYWTKGGTL RNVPVGGGCR KNKRTTSKKS QLDHESIANS TNYPLSSFTP LSCYDSSDLS 120 LAFAKLQKQA SGNLGIEEND MSMMCNNVYY DDFLGAQRGG FLELTSNGFH HNMYHGIGND 180 IGNLGQVENG EIMGLNVSAE MGMLYDQEMI FPWQINGEVN NMSDFEDSNR QNWNGFDSSF 240 HGLNHSSLIA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G60200.1	6e-47	Dof family protein

Link Out ? help Back to Top
Ensembl	OIT30614