PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIT30585 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | FAR1 | ||||||||
Protein Properties | Length: 253aa MW: 29271.3 Da PI: 9.3611 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 88 | 1.4e-27 | 37 | 126 | 1 | 91 |
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 +fYneYA+++GFs+rk++ +++k+ g +t+r+ +C keg+r ++k++ ++ +++r +tr+gC+a+++++++ +gk++++k++ eHnH+l p OIT30585 37 NFYNEYARRIGFSTRKKYVNTNKKLGYVTSRKITCFKEGFRGDDKRR-TQVKNPRRVTRIGCQAHVVITRQPSGKYRISKVDVEHNHSLLP 126 6******************************************9999.9***************************************975 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 253 aa Download sequence |
MENVDKSEEV LPNKPQVYID FEPKLGIEFE SDDSAINFYN EYARRIGFST RKKYVNTNKK 60 LGYVTSRKIT CFKEGFRGDD KRRTQVKNPR RVTRIGCQAH VVITRQPSGK YRISKVDVEH 120 NHSLLPPSIV HMLPSHRKIN KVQAHEIDLA EDAGLMSKAT FDFMSLQAGG RESLGYTTQD 180 QKNYLRTKRQ KAMKEGEAGA LLKYFEKKRI EDPSFFFAVQ LDVDDMITNI FWADSKMIMD 240 YEIFGDVLSF DTT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G38180.1 | 7e-60 | FAR1 family protein |
Link Out ? help Back to Top | |
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Ensembl | OIT30585 |