PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIT30479

Organism

Nicotiana attenuata

Taxonomic ID

49451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

WOX

Protein Properties

Length: 269aa MW: 30083.6 Da PI: 5.869

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIT30479	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	67.6	1.6e-21	89	149	2	57
T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 r+R+t+t+ ql++Le+ F + n +ps+++++e+++ l +++e++V++WFqNrRa+ k+ OIT30479 89 RQRWTPTPMQLQILERIFDQgNGTPSKQKIKEITSDLsqhgQISETNVYNWFQNRRARSKR 149 89***************99************************************97 PP
2	Wus_type_Homeobox	101.6	5.6e-33	89	151	3	65
Wus_type_Homeobox 3 rtRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 r+RWtPtp Q++iLe+++++G tP+k++i++it+ L+++G+i+++NV++WFQNr+aR+++kq OIT30479 89 RQRWTPTPMQLQILERIFDQGNGTPSKQKIKEITSDLSQHGQISETNVYNWFQNRRARSKRKQ 151 89***********************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 269 aa Download sequence
MEWEKQQQPP QTAEEMGGGG GGGGMFVKVM TDEQMEVLRK QIAVYATICE QLVDLHKSMA 60 SQHDLAGVRL GNLYCDPLVT SAGHKITGRQ RWTPTPMQLQ ILERIFDQGN GTPSKQKIKE 120 ITSDLSQHGQ ISETNVYNWF QNRRARSKRK QQVATTNNTE SEVETEVESP NEKKTRPEDL 180 QSPHMPTSRA EDVGYQNPEV SSGMHSLDPR TSKPEPVFPS EGTSKPAGSY GEMSFYGMSN 240 PRMDQLMGKM EGPGSYHPYL HAEDYNMTG

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	143	151	RRARSKRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G35550.1	1e-82	WOX family protein

Link Out ? help Back to Top
Ensembl	OIT30479