PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT30401
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family WRKY
Protein Properties Length: 349aa    MW: 38580.7 Da    PI: 10.2616
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT30401genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY100.21.2e-31277334359
               -SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
      WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
               D y+WrKYGqK++kgs++pr+YY+C+s  gCp++k+ver+ +dp+++++tYegeHnh+
  OIT30401 277 DDYSWRKYGQKPIKGSPHPRGYYKCSSVrGCPARKHVERALDDPTMLIVTYEGEHNHS 334
               99************************988****************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 349 aa     Download sequence    
MAVELMTSGY SRRDSFSSKM EEKAVQEAAT AGLQSVEKLI RLLSQSHQNQ QQQQKLDQNP  60
SVSADYTAVA DVAVNKFKKF ISLLDKNRTG HARFRKGPIS TPLPPPPKPQ QQRLDQNSIK  120
NQNLQIEESE KPQTNTPKIY CPTPIQRLPP LPHNHLQLVK NGSIERKESS TTINFASASP  180
ANSFMSSLTG ETESLQQSLS SGFQITNLST VSSAGRPPLS TSSFKRKCSS MDDTALKCNS  240
AGGSSGRCHC PKKRKSRVKR VVRVPAISMK MADIPPDDYS WRKYGQKPIK GSPHPRGYYK  300
CSSVRGCPAR KHVERALDDP TMLIVTYEGE HNHSHSITES PAAHVLESS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24240.12e-90WRKY family protein