PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIT30267

Organism

Nicotiana attenuata

Taxonomic ID

49451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

bZIP

Protein Properties

Length: 451aa MW: 48443.4 Da PI: 6.4564

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIT30267	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	50.1	5.8e-16	246	301	3	58
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevak 58 + kr rr+ +NRe+ArrsR+RK+a + eLe+ v +L eN++L k+l ++ ++ + OIT30267 246 DAKRVRRMLSNRESARRSRRRKQAHLTELETQVSQLRVENSSLLKRLTDITHKYNE 301 579*******************************************9999888776 PP

Sequence ? help Back to Top
Protein Sequence Length: 451 aa Download sequence
MDRVFSVDDD IGDHFWSTPP TADLGVDSPS AAAAAASYSK MMNRSSSEWA FQRFLQEATA 60 AGTSTSSHPQ PPTMTASSSS SSHQNDVVEI KDENLSTPNL NPSTALNSKP ASSFGLAPPP 120 NIAVDSEEYQ AFLKSQLHLA CAAVALTRGK SLNPQDSGST AHDKGSETAS AAQSGSHVST 180 LGSGQEVAKI QDKDAGGPVG IPSLPPVQKK PVVQVRSTTS GSSREQSDDD EAEGEAETNQ 240 GMDPTDAKRV RRMLSNRESA RRSRRRKQAH LTELETQVSQ LRVENSSLLK RLTDITHKYN 300 EAAVDNRVLK ADVETLRAKV KMAEETVKRV TGLNPLFQAM SEISSMVMPS YSGSPSDTSA 360 DAAVPVQDDP KHHYYQQPPN NHMPPHDPRI QNGMVDVPPI ENVQQNPATT AVGGNKMGRT 420 ASMQRVASLE HLQKRIRGEI SSSGTQGRGE Q

Sequence ? help Back to Top

Protein Sequence Length: 451 aa Download sequence

MDRVFSVDDD IGDHFWSTPP TADLGVDSPS AAAAAASYSK MMNRSSSEWA FQRFLQEATA  60
AGTSTSSHPQ PPTMTASSSS SSHQNDVVEI KDENLSTPNL NPSTALNSKP ASSFGLAPPP  120
NIAVDSEEYQ AFLKSQLHLA CAAVALTRGK SLNPQDSGST AHDKGSETAS AAQSGSHVST  180
LGSGQEVAKI QDKDAGGPVG IPSLPPVQKK PVVQVRSTTS GSSREQSDDD EAEGEAETNQ  240
GMDPTDAKRV RRMLSNRESA RRSRRRKQAH LTELETQVSQ LRVENSSLLK RLTDITHKYN  300
EAAVDNRVLK ADVETLRAKV KMAEETVKRV TGLNPLFQAM SEISSMVMPS YSGSPSDTSA  360
DAAVPVQDDP KHHYYQQPPN NHMPPHDPRI QNGMVDVPPI ENVQQNPATT AVGGNKMGRT  420
ASMQRVASLE HLQKRIRGEI SSSGTQGRGE Q

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	261	268	RRSRRRKQ
2	263	268	SRRRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G28770.2	7e-79	bZIP family protein

Link Out ? help Back to Top
Ensembl	OIT30267