PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT30246
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family ERF
Protein Properties Length: 283aa    MW: 31650.8 Da    PI: 9.5387
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT30246genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP264.71.9e-203080256
       AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
              ++ GVr+++ +grWvAeI+d s   +r r +lg+++t+eeAa+a+++a+++l+ge
  OIT30246 30 KFVGVRQRP-SGRWVAEIKDSS---QRVRLWLGTYDTPEEAARAYDEAARALRGE 80
              799******.7*********43...36**************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 283 aa     Download sequence    
MAGTETMKTT NTNTNTTKSS PQLNKSISRK FVGVRQRPSG RWVAEIKDSS QRVRLWLGTY  60
DTPEEAARAY DEAARALRGE NARTNFASTL SNPNSDHDQS INMLQSNDSK HGLSFSSLKA  120
KLSKNLHNIM ARNSENKLSS SKNRVSDHFT FARIFHFKNN YHQYQSQHMD MKKIEKVVQP  180
SIRVLPQVTD NNNNNDLSSW ENSSVSDCSS EWTAFRQLGL DSDNGSSDAS EYFLGSDPMA  240
GWVSSPDIMS SSSEGSRSKR FKVSSSVMVP PTFSESPLHG DNY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.19e-18ERF family protein