PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIT30112

Organism

Nicotiana attenuata

Taxonomic ID

49451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

CAMTA

Protein Properties

Length: 964aa MW: 108073 Da PI: 6.2256

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIT30112	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	172.6	5.6e-54	13	127	3	116
CG-1 3 ke.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqrrcywlL 102 +e + rwlk+ e++ iL n+e+h+l++e++++p+sgsl+L+n++++r+frkDG+sw+kkkdg+tv E+he+LKvg+ e+l+cyYah+e+np+fqrr+yw+L OIT30112 13 REaQIRWLKPAEVLFILRNHEHHQLSNEPAQKPPSGSLFLFNKRVLRFFRKDGHSWRKKKDGRTVGEAHERLKVGNAEALNCYYAHGEQNPNFQRRSYWML 113 55589********************************************************************************************** PP CG-1 103 eeelekivlvhyle 116 + +e+ivlvhy++ OIT30112 114 DPVYEHIVLVHYRD 127 **********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 964 aa Download sequence
MAESGYDIND LVREAQIRWL KPAEVLFILR NHEHHQLSNE PAQKPPSGSL FLFNKRVLRF 60 FRKDGHSWRK KKDGRTVGEA HERLKVGNAE ALNCYYAHGE QNPNFQRRSY WMLDPVYEHI 120 VLVHYRDITE GRQNPAFMSE SSPISSTFSP SPSSYSTQQT GSTVIAGESY EQYQNQSSPG 180 EICSDAVINN NRMSDITGRT NEVMSSPGLE MSHALRRLEE QLSLNDDSFK EIDPLYADAI 240 SDDSSLVEMQ GNSNSLLLQH HSAESSESHH QHLTQDGHIW KDMLDHYGIS TATESLNKSL 300 PMLDENGMLQ ISSERGAIEA YQSDKWPNFS EKEAQKAPIP AFKRLENFKY HAYSPGVTAF 360 GSNSDQCTTI FDQDQIGTSL EDEMSLTISQ KQKFTIRDIS PDWGYSSEAT KVVIIGSFLC 420 NPSECMWTCM FGDTEVPIQI IQEGVICCQA PPHLPGKVTL CVTSGNRESC SEVKEFEYRV 480 KPDDCARNNR SDVEGAYKST EELLVLVRFV QMLLLDLSVQ KEDSSELSND FLEKSKANED 540 SWSQVIESLL FGTSTSTITI DWLLQELLKD KFQQWLSYKL QRKDNQMGCS LSKKEQGIIH 600 MVSGLGFEWA LHPILNAGVS VNFRDINGWT ALHWAARFGR EKMVASLIAF GASAGAVTDP 660 SSRDPVGKTA ASIASSCGHK GLAGYLSEVA LTSHLSSLTL VESELSKGTA DVEAEKTISS 720 ISNTSATTNE DQRSLKDSLA AVRNAAQAAA RIQSAFRAHS FRKRQQRESA VANTASGDEY 780 GILSNDIHGL SAASKWAFRN TRDYNSAALA IQKKYRGWKG RKDFLAFRQK VVKIQAHVRG 840 YQVRKQYKVC WAVGILEKVV LRWRRRGVGL RGFRPDAESI DESEDEDILK VFRKQKVDAA 900 LDEAVSRVLS MVESPGARQQ YHRILEKYRQ AKAELEGAES ETASTAHGDM SNMENDDIYQ 960 FPSY

Sequence ? help Back to Top

Protein Sequence Length: 964 aa Download sequence

MAESGYDIND LVREAQIRWL KPAEVLFILR NHEHHQLSNE PAQKPPSGSL FLFNKRVLRF  60
FRKDGHSWRK KKDGRTVGEA HERLKVGNAE ALNCYYAHGE QNPNFQRRSY WMLDPVYEHI  120
VLVHYRDITE GRQNPAFMSE SSPISSTFSP SPSSYSTQQT GSTVIAGESY EQYQNQSSPG  180
EICSDAVINN NRMSDITGRT NEVMSSPGLE MSHALRRLEE QLSLNDDSFK EIDPLYADAI  240
SDDSSLVEMQ GNSNSLLLQH HSAESSESHH QHLTQDGHIW KDMLDHYGIS TATESLNKSL  300
PMLDENGMLQ ISSERGAIEA YQSDKWPNFS EKEAQKAPIP AFKRLENFKY HAYSPGVTAF  360
GSNSDQCTTI FDQDQIGTSL EDEMSLTISQ KQKFTIRDIS PDWGYSSEAT KVVIIGSFLC  420
NPSECMWTCM FGDTEVPIQI IQEGVICCQA PPHLPGKVTL CVTSGNRESC SEVKEFEYRV  480
KPDDCARNNR SDVEGAYKST EELLVLVRFV QMLLLDLSVQ KEDSSELSND FLEKSKANED  540
SWSQVIESLL FGTSTSTITI DWLLQELLKD KFQQWLSYKL QRKDNQMGCS LSKKEQGIIH  600
MVSGLGFEWA LHPILNAGVS VNFRDINGWT ALHWAARFGR EKMVASLIAF GASAGAVTDP  660
SSRDPVGKTA ASIASSCGHK GLAGYLSEVA LTSHLSSLTL VESELSKGTA DVEAEKTISS  720
ISNTSATTNE DQRSLKDSLA AVRNAAQAAA RIQSAFRAHS FRKRQQRESA VANTASGDEY  780
GILSNDIHGL SAASKWAFRN TRDYNSAALA IQKKYRGWKG RKDFLAFRQK VVKIQAHVRG  840
YQVRKQYKVC WAVGILEKVV LRWRRRGVGL RGFRPDAESI DESEDEDILK VFRKQKVDAA  900
LDEAVSRVLS MVESPGARQQ YHRILEKYRQ AKAELEGAES ETASTAHGDM SNMENDDIYQ  960
FPSY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G67310.1	0.0	CAMTA family protein

Link Out ? help Back to Top
Ensembl	OIT30112