PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIT30050

Organism

Nicotiana attenuata

Taxonomic ID

49451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

NAC

Protein Properties

Length: 376aa MW: 42873.8 Da PI: 4.5312

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIT30050	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	59.2	1.4e-18	8	147	3	128
NAM 3 pGfrFhPtdeelvveyLkkkvegkkleleev.ikevdiy.kvePwdLp.k...kvkaeekewy.fFskrdkkyatgkrknr.atksgyWkatgkdkevlsk 95 GfrF+Ptd+e + +L + ++g++++ + + ++vd+y k ePw++ + + + e++ y +F+++ kk++ + r +r + ++g+Wk+ k k+v+ k OIT30050 8 EGFRFRPTDSEGL-TFLLRFIAGQEMHDSGFiTTNVDVYgKQEPWEIYdHgvpCGDDEDNTSYrYFITKLKKKS-NARYHRsVGNKGTWKQDNKGKPVHYK 106 7*********99.899999999998887883566799456***743555333344444424455445444.5677775888**********99 PP NAM 96 ......kgel..vglkktLvfykg..rapkgektdWvmheyrl 128 + + +g k++L + ++ ++ + +W+m+ey+l OIT30050 107 nmgnssS--VvnIGSKTSLSYKNKkfYPEDQKDGHWLMKEYEL 147 6655433..156*****95522455566789****97 PP

Sequence ? help Back to Top
Protein Sequence Length: 376 aa Download sequence
MEHLKFEEGF RFRPTDSEGL TFLLRFIAGQ EMHDSGFITT NVDVYGKQEP WEIYDHGVPC 60 GDDEDNTSYR YFITKLKKKS NARYHRSVGN KGTWKQDNKG KPVHYKNMGN SSSVVNIGSK 120 TSLSYKNKKF YPEDQKDGHW LMKEYELSKV ILHKFDKDRR DYVLCAIKKL KHVNSSSETS 180 TITTLNNISD GTDEVTSSVD GLLATKNCKD YYNMCKNSEH SETMAFQESM VMNNSVDEPL 240 QIVDKPTEGT AFEVAELDVP DDLYQWVGKE LDEINQILDG VPEVDVAVEP LAAVEPDATY 300 ICGQHSFEAT ARYDPSMPDM SRNSAHIEYS EVADMSQMNL ISFDQSVPED VLGLNPWDIM 360 DSDEFNRMLE DVSRCI

Sequence ? help Back to Top

Protein Sequence Length: 376 aa Download sequence

MEHLKFEEGF RFRPTDSEGL TFLLRFIAGQ EMHDSGFITT NVDVYGKQEP WEIYDHGVPC  60
GDDEDNTSYR YFITKLKKKS NARYHRSVGN KGTWKQDNKG KPVHYKNMGN SSSVVNIGSK  120
TSLSYKNKKF YPEDQKDGHW LMKEYELSKV ILHKFDKDRR DYVLCAIKKL KHVNSSSETS  180
TITTLNNISD GTDEVTSSVD GLLATKNCKD YYNMCKNSEH SETMAFQESM VMNNSVDEPL  240
QIVDKPTEGT AFEVAELDVP DDLYQWVGKE LDEINQILDG VPEVDVAVEP LAAVEPDATY  300
ICGQHSFEAT ARYDPSMPDM SRNSAHIEYS EVADMSQMNL ISFDQSVPED VLGLNPWDIM  360
DSDEFNRMLE DVSRCI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G77450.1	1e-12	NAC family protein

Link Out ? help Back to Top
Ensembl	OIT30050