PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | OIT29779 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
|
||||||||
Family | ERF | ||||||||
Protein Properties | Length: 448aa MW: 48609.1 Da PI: 7.7983 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 64.6 | 2e-20 | 225 | 274 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr+++ +g+W+AeIrdp + +r++lg+f+tae Aa+a+++a+++++g OIT29779 225 RYRGVRQRP-WGKWAAEIRDP-----HkaARVWLGTFDTAEAAARAYDEAALRFRG 274 7********.**********7.....337*************************98 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 448 aa Download sequence |
MCLLKVANPR KSSEYVRFTD TSDSEITTTT AAEGGAQPYG QSDQFFEQMI QQQIQQEADY 60 LLPTSSAMPM FTGYGQTRDM SAMVTALTHV VSGQNYRPDI SGSVTPSFGG GGSRIYSANS 120 PSSAYSSSSS GSRAGQKRSR DQEESVTQIL EQSHHGVYGG FGEFRGRLPS SSVKAEEATS 180 MVAPTISTIT TVPAFTTTTT TTTAEVATAA ASGTSEETGG ERRRRYRGVR QRPWGKWAAE 240 IRDPHKAARV WLGTFDTAEA AARAYDEAAL RFRGNRAKLN FPENVTRLLP QLQASQPTTR 300 LAISSSSTSA SQFPMASISQ PTAFFQPPHH QQQPIQSSDM TRDYWEYSQL LQNPADFFDQ 360 QQPSSLLEQM FFASSRAVLH SNTSSSLGNS AASSTSSPSY PLLFSGQQSS YYRPQTNQLQ 420 GTSSSSSSSS NFSAPFWSSS SHYPPSSS |
Nucleic Localization Signal ? help Back to Top | |||
---|---|---|---|
No. | Start | End | Sequence |
1 | 221 | 226 | ERRRRY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G64750.1 | 1e-15 | ERF family protein |
Link Out ? help Back to Top | |
---|---|
Ensembl | OIT29779 |