PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIT29770

Organism

Nicotiana attenuata

Taxonomic ID

49451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

bZIP

Protein Properties

Length: 430aa MW: 46921.1 Da PI: 5.9205

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIT29770	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	47	5.6e-15	225	281	3	59
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevakl 59 ++kr rr+ +NRe+ArrsR+RK+a + eLe+ v + eN++L k+ +++++ + OIT29770 225 DVKRVRRMLSNRESARRSRRRKQAHLTELETQVSQVRVENSSLLKRFTDISQKYNEA 281 579*****************************************9999999888765 PP

Sequence ? help Back to Top
Protein Sequence Length: 430 aa Download sequence
MDSVFSVDDI ADQLWSSPPP MRLSHELDSS STTSSSKMMN RSSSEWAFQR FLQEATAADT 60 TTSSSSSQQI KDQTLSQNLI ADQPKPPMSN TASFGSEPPP NIPIDSDEYQ AVLKKRLDLA 120 CAAFALTRAN CVKPQDSVSL PSEKGSLSAT ASQSGSQVPP KAGFGQELAK VQDKDADEPV 180 GIPPLPAVQK KPGIQVRSTT SGSSGEQSDD DDAEGETTQS TDPTDVKRVR RMLSNRESAR 240 RSRRRKQAHL TELETQVSQV RVENSSLLKR FTDISQKYNE AAVDNRVLKA DVETLRAKVK 300 MAEETVKRVT GLNPLFQAMS EISTMMMPSF TGSPFDSSAD AAVPEQDDPR HHYYQAPENS 360 HMPNHTPRMQ NGMIDIPSME NAHQSSAAEA IGGNKIGRTS SMQRVASLEH LQKRMRGEAS 420 TCGTQCGKEQ

Sequence ? help Back to Top

Protein Sequence Length: 430 aa Download sequence

MDSVFSVDDI ADQLWSSPPP MRLSHELDSS STTSSSKMMN RSSSEWAFQR FLQEATAADT  60
TTSSSSSQQI KDQTLSQNLI ADQPKPPMSN TASFGSEPPP NIPIDSDEYQ AVLKKRLDLA  120
CAAFALTRAN CVKPQDSVSL PSEKGSLSAT ASQSGSQVPP KAGFGQELAK VQDKDADEPV  180
GIPPLPAVQK KPGIQVRSTT SGSSGEQSDD DDAEGETTQS TDPTDVKRVR RMLSNRESAR  240
RSRRRKQAHL TELETQVSQV RVENSSLLKR FTDISQKYNE AAVDNRVLKA DVETLRAKVK  300
MAEETVKRVT GLNPLFQAMS EISTMMMPSF TGSPFDSSAD AAVPEQDDPR HHYYQAPENS  360
HMPNHTPRMQ NGMIDIPSME NAHQSSAAEA IGGNKIGRTS SMQRVASLEH LQKRMRGEAS  420
TCGTQCGKEQ

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	240	247	RRSRRRKQ
2	242	247	SRRRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G28770.2	5e-63	bZIP family protein

Link Out ? help Back to Top
Ensembl	OIT29770