PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT29714
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family B3
Protein Properties Length: 89aa    MW: 10454.2 Da    PI: 8.2438
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT29714genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B332.31.8e-103641886
              --HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-S CS
        B3 18 lpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldg 86
              +pk f e++    e + t  + +  g++W +++  + + +r +l++GWk+Fv  n++k g  v F+l++
  OIT29714  3 IPKCFYEHIP---EAH-TTAVLQYGGKEWFMRI--NVGERR-WLKEGWKSFVMKNDIKRGCLVKFELVE 64
              8999986664...333.5667778*********..777766.89**********************875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 89 aa     Download sequence    
QHIPKCFYEH IPEAHTTAVL QYGGKEWFMR INVGERRWLK EGWKSFVMKN DIKRGCLVKF  60
ELVEIAQILV VFKVEVKGQG THEDPVEIN