PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIT29678

Organism

Nicotiana attenuata

Taxonomic ID

49451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

G2-like

Protein Properties

Length: 367aa MW: 41682 Da PI: 7.0071

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIT29678	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	102.6	2.5e-32	226	281	1	56
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 k+r++W+peLH+rF++a++qLGGs+ AtPk+i+elm+v+gLt+++vkSHLQkYRl+ OIT29678 226 KQRRCWSPELHRRFIDALKQLGGSQAATPKQIRELMQVDGLTNDEVKSHLQKYRLH 281 79****************************************************97 PP
2	Myb_DNA-binding	46.7	7.1e-15	228	279	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r W++e++ +++da kqlGg t+k I + m+ g+t ++ks++qky+ OIT29678 228 RRCWSPELHRRFIDALKQLGGSqaaTPKQIRELMQvDGLTNDEVKSHLQKYR 279 568***************99***************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 367 aa Download sequence
MIGNSVYEKT LKIEDYVKRL EDEMKKIDAF KRELPLCLLL VNDAITALRE ESTQSKKPIV 60 EPVFEESIPL KKSSLKDDKV EMNKDNDSRE KMNWMSSVQL WNSDPQNPNT DIHNSKQSSK 120 SEPKKEEITQ CHMIHFNLVN PGIWEKAFSP FKGCSVFPVK VDRKEDKDDL PVLTLPTPGI 180 KNLEDTMING LSSKPSDNSV TSSIIVSYRS NIHIASQLQQ QQNARKQRRC WSPELHRRFI 240 DALKQLGGSQ AATPKQIREL MQVDGLTNDE VKSHLQKYRL HIRKLSDTQT PSTSESVVLG 300 NIWLPQDQYG ESSKQSSSQS GSPHCPLQLG GSSRGTSMTV GDSMEEEDDE RSESHSWKVQ 360 MSRKIDV

Sequence ? help Back to Top

Protein Sequence Length: 367 aa Download sequence

MIGNSVYEKT LKIEDYVKRL EDEMKKIDAF KRELPLCLLL VNDAITALRE ESTQSKKPIV  60
EPVFEESIPL KKSSLKDDKV EMNKDNDSRE KMNWMSSVQL WNSDPQNPNT DIHNSKQSSK  120
SEPKKEEITQ CHMIHFNLVN PGIWEKAFSP FKGCSVFPVK VDRKEDKDDL PVLTLPTPGI  180
KNLEDTMING LSSKPSDNSV TSSIIVSYRS NIHIASQLQQ QQNARKQRRC WSPELHRRFI  240
DALKQLGGSQ AATPKQIREL MQVDGLTNDE VKSHLQKYRL HIRKLSDTQT PSTSESVVLG  300
NIWLPQDQYG ESSKQSSSQS GSPHCPLQLG GSSRGTSMTV GDSMEEEDDE RSESHSWKVQ  360
MSRKIDV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G68670.1	3e-46	G2-like family protein

Link Out ? help Back to Top
Ensembl	OIT29678