PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIT29678 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | G2-like | ||||||||
Protein Properties | Length: 367aa MW: 41682 Da PI: 7.0071 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 102.6 | 2.5e-32 | 226 | 281 | 1 | 56 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 k+r++W+peLH+rF++a++qLGGs+ AtPk+i+elm+v+gLt+++vkSHLQkYRl+ OIT29678 226 KQRRCWSPELHRRFIDALKQLGGSQAATPKQIRELMQVDGLTNDEVKSHLQKYRLH 281 79****************************************************97 PP | |||||||
2 | Myb_DNA-binding | 46.7 | 7.1e-15 | 228 | 279 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r W++e++ +++da kqlGg t+k I + m+ g+t ++ks++qky+ OIT29678 228 RRCWSPELHRRFIDALKQLGGSqaaTPKQIRELMQvDGLTNDEVKSHLQKYR 279 568*****************99*****************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 367 aa Download sequence |
MIGNSVYEKT LKIEDYVKRL EDEMKKIDAF KRELPLCLLL VNDAITALRE ESTQSKKPIV 60 EPVFEESIPL KKSSLKDDKV EMNKDNDSRE KMNWMSSVQL WNSDPQNPNT DIHNSKQSSK 120 SEPKKEEITQ CHMIHFNLVN PGIWEKAFSP FKGCSVFPVK VDRKEDKDDL PVLTLPTPGI 180 KNLEDTMING LSSKPSDNSV TSSIIVSYRS NIHIASQLQQ QQNARKQRRC WSPELHRRFI 240 DALKQLGGSQ AATPKQIREL MQVDGLTNDE VKSHLQKYRL HIRKLSDTQT PSTSESVVLG 300 NIWLPQDQYG ESSKQSSSQS GSPHCPLQLG GSSRGTSMTV GDSMEEEDDE RSESHSWKVQ 360 MSRKIDV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G68670.1 | 3e-46 | G2-like family protein |
Link Out ? help Back to Top | |
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Ensembl | OIT29678 |