PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT29416
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family ARR-B
Protein Properties Length: 681aa    MW: 75002.6 Da    PI: 6.8746
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT29416genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like90.21.8e-28212265155
   G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
               k+r++W+ eLH++Fv av+qL G+ekA+Pk+il+lm+v+gLt+e+v+SHLQkYRl
  OIT29416 212 KARVVWSIELHRKFVAAVNQL-GIEKAVPKRILDLMNVDGLTRENVASHLQKYRL 265
               68*******************.********************************8 PP
2Myb_DNA-binding378.1e-12214264148
                      TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 
                      r  W+ e++ ++v av+qlG +   +k+I   m+  g+t++++ s++qky+
         OIT29416 214 RVVWSIELHRKFVAAVNQLGIEkaVPKRILDLMNvDGLTRENVASHLQKYR 264
                      678***********************************************7 PP
3Response_reg79.31.3e-26301381109
                   EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTTES CS
  Response_reg   1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaGak 95 
                   vl vdD+p+ ++ll  +l+k +y +v+++++++ al++l+e++  +Dl++ D+ mp+mdG++ll+     e++lp+i+++a+++ +++ + ++ Ga 
      OIT29416  30 VLAVDDDPICLKLLDGLLRKCQY-HVTTTSQARMALKMLRENRdrFDLVISDVHMPDMDGFKLLELVGL-EMDLPVIMLSANSDTKLVMKGISHGAC 124
                   799********************.***************999889*******************87754.558************************ PP

                   EEEESS--HHHHHH CS
  Response_reg  96 dflsKpfdpeelvk 109
                   d+l+Kp+  eel++
      OIT29416 125 DYLVKPVRLEELRN 138
                   ***********987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 681 aa     Download sequence    
MTVEEIRGNS KGGEKGNYQN YDNFPIGMRV LAVDDDPICL KLLDGLLRKC QYHVTTTSQA  60
RMALKMLREN RDRFDLVISD VHMPDMDGFK LLELVGLEMD LPVIMLSANS DTKLVMKGIS  120
HGACDYLVKP VRLEELRNVW QHVIRRKKVE PKSRSKSNDH DKSYPGSGEG GRGQSPTGNA  180
DQNGKLNKKR KDEEDEIDEN GTDNEDTANQ KKARVVWSIE LHRKFVAAVN QLGIEKAVPK  240
RILDLMNVDG LTRENVASHL QKYRLYLKRI SSVATQQANM VAALGGKDYM RMGSLDGLGD  300
FRTLAGSGRY AHPTLSSYTS GGMLGRLNSA AGLSVRNLAT PQLLQPSHGQ SLNNSVNAFA  360
KLNPNILPAS QNASLFHGIP ASLELDQLQQ NKSSVHIPLD ESRLLTTDVL GCTNNSLSNV  420
SNNHMILQGN SINMTPFSSD SFNTGVNGSS NFLDQGRCNE NWQNSVQLSK FQSSSFPLTE  480
AFLNSHLPQS SVRDDNSSAA PPHLLSRSLD FASTTTVSPS FEDSRGKIQF RDGTAGAVQS  540
MNQAPSQAWA DNKQRYSNNS NNTFGNLSSQ VPINGGNMAS LSHSIHQSNE NFGRRMDMSL  600
IGRSNGGSSA LLQHAENEKL TPDSRTRSNE DYLLEPTKQQ VGFSPQGYDS LDDLMSAMKR  660
DQDGGMLEEE QYGFENYPFG S
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G25180.11e-128ARR-B family protein