PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT29406
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family WRKY
Protein Properties Length: 345aa    MW: 39009 Da    PI: 6.7155
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT29406genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY87.21.4e-27131191259
               --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
      WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
               dDgy+WrKYGqK++ gs +pr+YYrCt++   gC ++k+v+rs  + +++e+tY+g+H ++
  OIT29406 131 DDGYSWRKYGQKDILGSIHPRAYYRCTHRntqGCLATKQVQRSVGNSSIFEVTYKGRHSCK 191
               8***************************98889*************************996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 345 aa     Download sequence    
MEKVQALEKK KLINELTQGR EFVNQLKKQI GPLASPEECD LLLGKILSSL EKSLSILNLK  60
ALLLEGGNAN STSSCSSISF LGNNISPKSE VLDSTKDQMV GKNVFTKKRK TPHQWSKQVS  120
ICGTGLESPH DDGYSWRKYG QKDILGSIHP RAYYRCTHRN TQGCLATKQV QRSVGNSSIF  180
EVTYKGRHSC KIAQSEIFSL ENQKRQKHNK KQELVYQRQE QEMVIFNSGP NHKVENFSLT  240
KEEVFTPFSF SPTPLNPIEE TQYFSNSMTP FSLPITSELP TYMSLLTDHN EQFAMENILQ  300
SSDSDVTELI STPTSISNSP FGGDWDFSMD FEPSTVTFDI EEFFK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G11070.26e-39WRKY family protein