PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT29403
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family NAC
Protein Properties Length: 305aa    MW: 34530 Da    PI: 8.459
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT29403genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM107.61.5e-33632031128
       NAM   1 lppGfrFhPtdeelvveyLkkkvegkk......lelee...v.ikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratk......sgyWk 84 
               lp+G++F+P+d+e++ e+L++kv +++      +   +     i+   +i++++P++Lp  v+++ +  +fF++ +k+y+tg+rk+r+++      + +W+
  OIT29403  63 LPAGVKFDPSDNEIL-EHLEAKVISDTlklhplI---DefiLtIDGEnGICYTHPEKLP-GVSKDGQVRHFFHRPSKAYTTGTRKRRKVHteidggETRWH 158
               799***********9.99*****99995554443...143333666657**********.566677888******************744446655778** PP

       NAM  85 atgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128
               +tgk+++v+  +g l+g kk+Lv+y   gr++k+ekt+Wvmh+y+l
  OIT29403 159 KTGKTRPVYI-GGVLKGYKKILVLYtnYGRQRKPEKTNWVMHQYHL 203
               **********.**************66589**************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 305 aa     Download sequence    
MTWCSQSNGE TALPIISTPP SDENNIMITS KVDHEIRIIT CPSCGHSIEL QHQQRGIHDL  60
PGLPAGVKFD PSDNEILEHL EAKVISDTLK LHPLIDEFIL TIDGENGICY THPEKLPGVS  120
KDGQVRHFFH RPSKAYTTGT RKRRKVHTEI DGGETRWHKT GKTRPVYIGG VLKGYKKILV  180
LYTNYGRQRK PEKTNWVMHQ YHLGENEEEK DGELVVSKVF YQTQPRQCGS LSIRKPVDNS  240
KSRSLSRQDS PILKTTNFVD YYNPPFISYD IGSQNRESSP QLIQNLVVHG DSSSFVIPSN  300
ASKEK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G28500.11e-122NAC family protein