PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | OIT29386 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
|
||||||||
Family | B3 | ||||||||
Protein Properties | Length: 99aa MW: 11818.7 Da PI: 6.5257 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 33.7 | 6.4e-11 | 4 | 74 | 9 | 86 |
HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-S CS B3 9 dvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldg 86 ++ k++ + +pk+ e++ e t + + g++W +++ + + +r +l++GWk+Fv ++k g fv F+l++ OIT29386 4 SYIKQDYMHIPKRLYEHIP---EA-NTTAVLQYGGKEWFMEM--NIGERR-WLKDGWKQFVMMSDIKRGCFVKFELVE 74 5678899*******97764...22.35677788*********..666655.8***********************865 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 99 aa Download sequence |
LKDSYIKQDY MHIPKRLYEH IPEANTTAVL QYGGKEWFME MNIGERRWLK DGWKQFVMMS 60 DIKRGCFVKF ELVEIAQLYV IFKLQVKGQG TEEDPVEIN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G06220.1 | 1e-07 | B3 family protein |
Link Out ? help Back to Top | |
---|---|
Ensembl | OIT29386 |