PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIT29281

Organism

Nicotiana attenuata

Taxonomic ID

49451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

Protein Properties

Length: 434aa MW: 48480.8 Da PI: 8.465

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIT29281	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	98.2	5.1e-31	85	190	1	99
EEEE-..-HHHHTT-EE--HHH.HTT.....---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-.SS.SEE..EE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.....ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkld.gr.sefelvv 94 f+kv tpsdv+k++rlv+pk++ae++ +++ +++ l +ed++g+ W+++++y+++s++yv+tkGW++Fvk+++L++gD+v F++ g+ + +l++ OIT29281 85 FDKVVTPSDVGKLNRLVIPKQHAEKYfpldsSSNDKGGLLLNFEDRNGKPWRFRYSYWNSSQSYVMTKGWSRFVKEKKLDAGDIVSFQRGaGElVKHRLFI 185 89**************************955666889***********************************************6657777888888 PP EEE-S CS B3 95 kvfrk 99 ++r+ OIT29281 186 DWRRR 190 88876 PP

Sequence ? help Back to Top
Protein Sequence Length: 434 aa Download sequence
MNFFTSRRGI QQQTGSSKGM CPFSQSSSSS STSSSYHNQQ QQQQHRESTE LMLMDSSPTA 60 TRNHGDGDEV AGGEAHHLIE REHMFDKVVT PSDVGKLNRL VIPKQHAEKY FPLDSSSNDK 120 GGLLLNFEDR NGKPWRFRYS YWNSSQSYVM TKGWSRFVKE KKLDAGDIVS FQRGAGELVK 180 HRLFIDWRRR PDAPDMNPFM VPHHFSNWNH GRLFLQPFQR GPLVPSFTQQ HPHSQYSHNS 240 LLESSSNMAQ QQQSHHYPHS YIYGIGNTSP AYYNTCFNNS SISTNATVVN ANPCAGGSGN 300 YVRSAATASQ LVLPISQHEL EIMQMQRGCS SVGRSSGGEP MVFNSVPVVQ GKVAAKRLRL 360 FGVNMDCPMD HSDMFSSSTI PTTYSHAPYF SSSLSTSSTP LLQLRNFNSQ LQAVPSDEES 420 SDKGKASMSL DLDI

Sequence ? help Back to Top

Protein Sequence Length: 434 aa Download sequence

MNFFTSRRGI QQQTGSSKGM CPFSQSSSSS STSSSYHNQQ QQQQHRESTE LMLMDSSPTA  60
TRNHGDGDEV AGGEAHHLIE REHMFDKVVT PSDVGKLNRL VIPKQHAEKY FPLDSSSNDK  120
GGLLLNFEDR NGKPWRFRYS YWNSSQSYVM TKGWSRFVKE KKLDAGDIVS FQRGAGELVK  180
HRLFIDWRRR PDAPDMNPFM VPHHFSNWNH GRLFLQPFQR GPLVPSFTQQ HPHSQYSHNS  240
LLESSSNMAQ QQQSHHYPHS YIYGIGNTSP AYYNTCFNNS SISTNATVVN ANPCAGGSGN  300
YVRSAATASQ LVLPISQHEL EIMQMQRGCS SVGRSSGGEP MVFNSVPVVQ GKVAAKRLRL  360
FGVNMDCPMD HSDMFSSSTI PTTYSHAPYF SSSLSTSSTP LLQLRNFNSQ LQAVPSDEES  420
SDKGKASMSL DLDI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G46870.1	4e-67	B3 family protein

Link Out ? help Back to Top
Ensembl	OIT29281