PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT29024
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family B3
Protein Properties Length: 399aa    MW: 44516.3 Da    PI: 6.9651
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT29024genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B3100.69.1e-3246150199
               EEEE-..-HHHHTT-EE--HHH.HTT....---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-.SS.SEE..EEE CS
        B3   1 ffkvltpsdvlksgrlvlpkkfaeeh....ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkld.gr.sefelvvk 95 
               f+kv tpsdv+k++rlv+pk++ae++    ++ +e++  l +ed++g+ W+++++y+++s++yv+tkGW++Fvk+++L++gD+v F++  g+  + +l++ 
  OIT29024  46 FDKVVTPSDVGKLNRLVIPKQHAEKYfpldSSTNEKGLLLNFEDRNGKPWRFRYSYWNSSQSYVMTKGWSRFVKEKKLDAGDIVSFQRGiGElGKDRLFID 146
               89***************************966778999*************************************************65599999999999 PP

               EE-S CS
        B3  96 vfrk 99 
               ++r+
  OIT29024 147 WRRR 150
               9997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 399 aa     Download sequence    
MDTPPTANHC EGDADEHHHS HHHNLVDLGV GATANSMALI EREHMFDKVV TPSDVGKLNR  60
LVIPKQHAEK YFPLDSSTNE KGLLLNFEDR NGKPWRFRYS YWNSSQSYVM TKGWSRFVKE  120
KKLDAGDIVS FQRGIGELGK DRLFIDWRRR PDAPTDHLHT NFMTHVPLSH HFSNNFQYRS  180
NINHQYPAAW NHPLFLQQDH SPLHSRPAGS MSHQQQYSYS AYGIGNSPNY YDTASNFNSM  240
ASSRIVVNGN PCPSGSVVYL RSGSVAQVPQ QEVGLMKQMQ RGSGSSSIVG EGSGRLVEPM  300
VFDSVPVVQG KAAPKRLRLF GVNMDCPVSD SDESCDMSSS SSSLPTASYS HTPQFSTSTP  360
SLQFRTFNNY DDAKPLQTAP TDEESSGKGK ESMSLDLEI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G01030.17e-73B3 family protein