PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT28936
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family WRKY
Protein Properties Length: 516aa    MW: 57025.9 Da    PI: 6.5667
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT28936genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY96.81.5e-30284342259
               --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
      WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
               +Dg++WrKYGqK+ kg+++pr+YYrCt+a gCpv+k+v+r+aed +++++tYeg+Hnh+
  OIT28936 284 SDGCQWRKYGQKMAKGNPCPRAYYRCTMAvGCPVRKQVQRCAEDRTILTTTYEGTHNHP 342
               7*********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence    Length: 516 aa     Download sequence    
MDKAGWGLTL ENISEHQVGF FKNKPVYGFN LSPRLNNMNM NPREEQASFS SADEKRVMLN  60
EVDFFSDKRI MPMDVVIKKE DSHGENTTST RSELLVNTGL QLVSVNTGSD QSTVDDGISS  120
EIEDKRAKIE LAQLQVELGR MNAENQRLRE MLTQVSNNYT ALQMHLVTLM QQQQQNISRT  180
QNDHEIVEAK HEEKDGNMVP RQFLELGPND EPYSLNSHYS SSEERTVSES PRNKGIGREE  240
TPESESNKVP KLNSSNPIDQ ATDQATMRKA RVSVRARSEA PMISDGCQWR KYGQKMAKGN  300
PCPRAYYRCT MAVGCPVRKQ VQRCAEDRTI LTTTYEGTHN HPLPPAAMAM ASTTSAAANM  360
LLSGPMPSAD GLMNPNFIAR TILPCSPSVA TISASAPFPT ITLDLTQNQN SLSPYHQRTH  420
PTAQFQVPFP IGPHNPNFIT SMPPPPMPQS LHNQSKFSGL QVSQDIHHQP PQHALNQPSF  480
SDTLNAATAA ITADPNFTAA LAAAISSIIT GSQKEQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G62300.11e-129WRKY family protein