PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIT28812

Organism

Nicotiana attenuata

Taxonomic ID

49451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

WRKY

Protein Properties

Length: 309aa MW: 33387.6 Da PI: 5.4473

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIT28812	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	104.6	5.2e-33	164	221	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 +Dgy+WrKYGqK vk+s+fprsYYrCt ++C+vkk+vers+edp++v++tYeg+H h+ OIT28812 164 EDGYRWRKYGQKAVKNSPFPRSYYRCTNTKCTVKKRVERSSEDPSIVITTYEGQHCHH 221 8******************************************************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 309 aa Download sequence
MDDKDKVNDP LKSAAEFDAT ESSWSLGADS DNVYSFFGNT DRDNSILNEF GWNFAPSEAA 60 GDKDIAGGSG GAGGFDRIDD DLAGNSSTTP SASATEVPAT GKITDEPVSS SCSDDPPEKS 120 TASGGSSASR PPSDTASKVK KKGQKRIRQP RFAFMTKSEV DHLEDGYRWR KYGQKAVKNS 180 PFPRSYYRCT NTKCTVKKRV ERSSEDPSIV ITTYEGQHCH HTVGFPRGGL ISHEAAFTTH 240 QLSPLASQFY LPGGVQYPQE VPMSAPESRQ IPGESVEARR LPETSQPANQ LPTDEGLLGD 300 IVPPGMRSR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69310.2	2e-66	WRKY family protein

Link Out ? help Back to Top
Ensembl	OIT28812