PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT28680
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family ERF
Protein Properties Length: 321aa    MW: 35381.4 Da    PI: 4.5075
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT28680genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP253.94.4e-17150656
       AP2  6 VrwdkkrgrWvAeIrd.pse.ngkrkrfslgkfgtaeeAakaaiaarkklege 56
              Vr++  +g+WvAeIr+ +++ ng  kr +lg+f ta eAa a+++a+k l+g+
  OIT28680  1 VRQRT-WGKWVAEIREpVYNsNG--KRLWLGTFSTAVEAAIAYDEAAKVLYGH 50
              88887.**********7777665..***********************99986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 321 aa     Download sequence    
VRQRTWGKWV AEIREPVYNS NGKRLWLGTF STAVEAAIAY DEAAKVLYGH NAILNFPDYC  60
VQNSELANYS TSVSIARTTS LGSSESSVED SRIEPDLQTS DTPDDGVVAI TDEKTILDDP  120
TNLCSDGRAD GDPGAQQDSS VCCLNMESVV MEVDDSLDDM KSLNCSTRIG SKPILEPTSS  180
CVKVEAPSDN GFVQDRRLEC VDDANKVSNS MHILHHEITD VKPNDGIFQH HDVLRPNVSY  240
ESNDHVLLPC DPIALPDYIS ELTLHIHTGN VDLDLHTRKM LVELALKPHS LVSRGCLNQS  300
QAVWTVQPAG YQNLRALPKY T
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40340.12e-14ERF family protein