PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT28621
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family NAC
Protein Properties Length: 288aa    MW: 33125.2 Da    PI: 6.1711
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT28621genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM160.85.3e-50111391129
       NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kgelv 100
               lppGfrF P+deelv++yL kk+++++ +l+ ++ e+d++++ePw+Lp+ +k +++ewyfFs rd+kyatg r+nrat+sgyWkatgkd++vl+   ++ v
  OIT28621  11 LPPGFRFYPSDEELVCHYLFKKIANED-SLKGTLVEIDLHTCEPWQLPEVAKLNSSEWYFFSFRDRKYATGFRTNRATTSGYWKATGKDRTVLDPrARTPV 110
               79**********************999.45478***************87788899**************************************856667* PP

       NAM 101 glkktLvfykgrapkgektdWvmheyrle 129
               g++ktLvfyk+rap+g kt W+mhe+rle
  OIT28621 111 GMRKTLVFYKNRAPNGIKTGWIMHEFRLE 139
               **************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 288 aa     Download sequence    
MMGLRDIGAT LPPGFRFYPS DEELVCHYLF KKIANEDSLK GTLVEIDLHT CEPWQLPEVA  60
KLNSSEWYFF SFRDRKYATG FRTNRATTSG YWKATGKDRT VLDPRARTPV GMRKTLVFYK  120
NRAPNGIKTG WIMHEFRLEN PHIPPKEDWV LCRVFHKAKA ENSSNNNIVS PQNTYEVGVV  180
SSPNNNMDQF HALPYDGYRP NMAAAAVSQR PFHQRQKLFD LMEAENNQSS YPQLSQEMNK  240
APSNDQIAED EYGFLLDMNF EDPCLQDGGV NSSIEDMRFD NNNSLVFI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G28530.19e-93NAC family protein