PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIT28307

Organism

Nicotiana attenuata

Taxonomic ID

49451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

NAC

Protein Properties

Length: 398aa MW: 44608.1 Da PI: 4.8591

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIT28307	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	164.3	4.5e-51	28	155	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgel 99 l+pGfrFhPtdeelv +yL++k+ gk++++ ++++e+d+yk+ePw+L + ++k+++ ewyfFs+ dkky +g+r nrat gyWkatgkd+ v + k+++ OIT28307 28 LAPGFRFHPTDEELVRYYLRRKACGKPFRF-QAVTEIDVYKSEPWELAEysSLKSRDLEWYFFSPVDKKYGNGSRLNRATGLGYWKATGKDRFVRH-KSQT 126 579***********************99.88**********84346777888**********************************9.999 PP NAM 100 vglkktLvfykgrapkgektdWvmheyrl 128 +g+kktLvf++grap+g++t+Wvmheyrl OIT28307 127 IGMKKTLVFHSGRAPDGQRTNWVMHEYRL 155 ***************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 398 aa Download sequence
MEQEGSLVVA AAAGAVTVAA PAPAPTSLAP GFRFHPTDEE LVRYYLRRKA CGKPFRFQAV 60 TEIDVYKSEP WELAEYSSLK SRDLEWYFFS PVDKKYGNGS RLNRATGLGY WKATGKDRFV 120 RHKSQTIGMK KTLVFHSGRA PDGQRTNWVM HEYRLADEEL EKAGIVQDSF VLCRIFQKSG 180 LGPPNGDRYA PFVEEEWDDD IAMIPGGEAE DDVANGDETR VEGNDPDQDA LRKAPRYIEN 240 LIEPQSLPFV CKRESSEDAE LLSLSQSKRP KHADPSSSRA NGSEDSTITS QDPPTTMMTK 300 TNCCPTLLGF PLLESTETKE GQPSNPPTFD SSNLEKSVPP GYLKFISNLE NGILNVSMER 360 ETLKIEVMRA QAMINLLQSR VDLLTKENED MRRIVRED

Sequence ? help Back to Top

Protein Sequence Length: 398 aa Download sequence

MEQEGSLVVA AAAGAVTVAA PAPAPTSLAP GFRFHPTDEE LVRYYLRRKA CGKPFRFQAV  60
TEIDVYKSEP WELAEYSSLK SRDLEWYFFS PVDKKYGNGS RLNRATGLGY WKATGKDRFV  120
RHKSQTIGMK KTLVFHSGRA PDGQRTNWVM HEYRLADEEL EKAGIVQDSF VLCRIFQKSG  180
LGPPNGDRYA PFVEEEWDDD IAMIPGGEAE DDVANGDETR VEGNDPDQDA LRKAPRYIEN  240
LIEPQSLPFV CKRESSEDAE LLSLSQSKRP KHADPSSSRA NGSEDSTITS QDPPTTMMTK  300
TNCCPTLLGF PLLESTETKE GQPSNPPTFD SSNLEKSVPP GYLKFISNLE NGILNVSMER  360
ETLKIEVMRA QAMINLLQSR VDLLTKENED MRRIVRED

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G10490.1	6e-92	NAC family protein

Link Out ? help Back to Top
Ensembl	OIT28307