PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIT28305

Organism

Nicotiana attenuata

Taxonomic ID

49451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

G2-like

Protein Properties

Length: 362aa MW: 41027.1 Da PI: 7.1401

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIT28305	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	105.9	2.4e-33	21	75	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kprl+Wtp+LH+rFv+av+qLGG+ekAtPk+++++m+++gLtl+h+kSHLQkYRl OIT28305 21 KPRLKWTPDLHQRFVDAVAQLGGPEKATPKSLMRVMNIHGLTLYHLKSHLQKYRL 75 79****************************************************8 PP
2	Myb_DNA-binding	62.3	1e-19	23	74	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r++WT+++++++vdav+qlGg+ t+k+ +r m+ g+tl+++ks++qky+ OIT28305 23 RLKWTPDLHQRFVDAVAQLGGPekaTPKSLMRVMNiHGLTLYHLKSHLQKYR 74 89*************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 362 aa Download sequence
MALQNAQQNK DMNLVLSSDA KPRLKWTPDL HQRFVDAVAQ LGGPEKATPK SLMRVMNIHG 60 LTLYHLKSHL QKYRLGKSQA TDQSFDDNKE EGKLELCAIV PDDDTKENEI SRGLNQRTYF 120 NAEFREPQSD KLSLDNCDGA QNQMNESLQI ARALQMQMEV QRKLHQQIEV QRHLQLRIEA 180 QGKYLQSVLK KAQETLAGYG TSSVGVELAK AELSQLVSMV NNGCRPTSPL SAITEIDGLI 240 SKDTGRKQLN GEIMCSLESS LTSSGSSGRK EYQNDTRNTN TSIALSLNPE TKEKKRRRNN 300 NCDDICVEQP PSKRYHNQRS ENLAKIEFLE TIDLNSKCPN DYEYGPKVID LNNKEVEQFQ 360 WL

Sequence ? help Back to Top

Protein Sequence Length: 362 aa Download sequence

MALQNAQQNK DMNLVLSSDA KPRLKWTPDL HQRFVDAVAQ LGGPEKATPK SLMRVMNIHG  60
LTLYHLKSHL QKYRLGKSQA TDQSFDDNKE EGKLELCAIV PDDDTKENEI SRGLNQRTYF  120
NAEFREPQSD KLSLDNCDGA QNQMNESLQI ARALQMQMEV QRKLHQQIEV QRHLQLRIEA  180
QGKYLQSVLK KAQETLAGYG TSSVGVELAK AELSQLVSMV NNGCRPTSPL SAITEIDGLI  240
SKDTGRKQLN GEIMCSLESS LTSSGSSGRK EYQNDTRNTN TSIALSLNPE TKEKKRRRNN  300
NCDDICVEQP PSKRYHNQRS ENLAKIEFLE TIDLNSKCPN DYEYGPKVID LNNKEVEQFQ  360
WL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69580.1	6e-80	G2-like family protein

Link Out ? help Back to Top
Ensembl	OIT28305