PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OIT28079 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | ERF | ||||||||
Protein Properties | Length: 175aa MW: 19525.8 Da PI: 7.709 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 62.8 | 7.4e-20 | 16 | 65 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 +ykGVr +k +g+WvAe+r p++ r r++lg+++taeeAa+a++aa +l+g OIT28079 16 RYKGVRMRK-WGKWVAEVRQPKS---RDRIWLGSYDTAEEAARAYDAAVVCLRG 65 69*****99.*******999854...4*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 175 aa Download sequence |
MVRPKGNKEK KDNGDRYKGV RMRKWGKWVA EVRQPKSRDR IWLGSYDTAE EAARAYDAAV 60 VCLRGPSATI NFPNDPPLIP SSGPNCDQQQ LSPSQIQVAA SRHARRVCES AVVDSRLPAV 120 ETVFFRDNNS EFGCSSYVDC YNLAITDKSS TGDGEVLHDD LFDSCFYGSN PCRQL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G21960.1 | 1e-26 | ERF family protein |
Link Out ? help Back to Top | |
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Ensembl | OIT28079 |