PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT28033
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family ERF
Protein Properties Length: 165aa    MW: 18729 Da    PI: 7.074
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT28033genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP261.42e-19755254
       AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkle 54
              +y+GVr+++ +g+Wv+eIr+ps    ++r++lg+f tae+Aa+a+++a++ + 
  OIT28033  7 RYRGVRQRH-WGSWVSEIRHPSL---KTRIWLGTFETAEDAARAYDEAARLMC 55
              69******9.**********944...5**********************8775 PP
Sequence ? help Back to Top
Protein Sequence    Length: 165 aa     Download sequence    
MARPQQRYRG VRQRHWGSWV SEIRHPSLKT RIWLGTFETA EDAARAYDEA ARLMCGPIAR  60
TNFPYNASES QSPSTRFLSS ALIAKLHMTS LGTSTRSGAT KLDNNQIFPQ IGNKGDGKMH  120
LDMPYSEVQS ERAHQFKPLE DQDIEQMIEE LLDYGSIELS SVLNQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G25190.11e-50ERF family protein